FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806538

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806538
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34651
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA851624.576491298952412No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG14934.308677960232028No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG11343.272632824449511No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA11083.197598914894231No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC9442.7243081007763124No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT8612.484776774119073No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG5651.6305445730281956No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG5481.5814839398574354No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT4771.3765836483795562No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT4451.2842342212345963No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT3030.8744336382788376No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG2820.8138293267149578No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT2340.6753051859975181No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG2250.6493319096129981No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAAAGCTG2130.6147008744336383No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA1860.5367810452800785No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG1750.5050359296989986No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC1670.48194857291275867No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA1650.4761767337161987No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA1510.4357738593402788No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG1490.4300020201437188No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCAGCCTCCCAGATTGCTGGG1480.42711610054543875No Hit
CATAGATTAGGGGTGACGGACTAGCCATGCTGAAGTCCCATGATCTATGT1460.4213442613488788No Hit
CATAGATGATGTGAAAAGGACCCATGGCGTCAGTGTGGGAAGTAGGGAAT1450.4184583417505989No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTATGTGTAGAACCATGTCGTC1440.4155724221523188No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA1400.4040287437591989No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC1350.3895991457677989No Hit
CATAGACCAAACACAGAAGACATGGCAAAGCTGCTATGGGATCTTCTATG1330.3838273065712389No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAAGCTGCTATGGGA1290.372283628178119No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGATGTTTTAAAATGAGCA1230.354968110588439No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT1230.354968110588439No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG1200.34631035179359904No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC1000.2885919598279992No Hit
CATAGACTGGCGGTGATTGCTTTCCTGAGATTGGCCTCAGTTTCCCCTCC1000.2885919598279992No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG990.2857060402297192No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG990.2857060402297192No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG950.27416236183659926No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACTTGGCCTCAGTTTCCC940.27127644223831926No Hit
CATAGACCAGCTTTGCATGAGTGTGGTAGCACGCACCTGTAGTCACAGCT930.26839052264003926No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA930.26839052264003926No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACATGAATGTTGGAG910.2626186834434793No Hit
CATAGACTGGCGGTGATTGCTTTCCTCTTGGCCTCAGTTTCCCCTCCTTC860.24818908545207932No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTGAGGTAAAACTATTAGCGAGAC830.2395313266572393No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG820.2366454070589593No Hit
CATAGACCAAACACAGAAGACATGGCATCAGTGTACCAGTGTAGCAGACC810.23375948746067934No Hit
CATAGATTAGGGGTGACGGACTAGCCTAGACTTGGCCTCAGTTTCCCCTC790.22798764826411935No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTTGGAGAGGCACATCTATGTGTA770.2222158090675594No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTCTTGGCCTCAGTTTCCCC740.21355805027271937No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACAACACAGGATCCAGGTGTC740.21355805027271937No Hit
CATAGACTGGCGGTGATTGCTTTCCTACTTGGCCTCAGTTTCCCCTCCTT730.2106721306744394No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT720.2077862110761594No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT700.20201437187959945No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGG690.19912845228131945No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGACTTGGCCTCAGTTTCC640.1846988542899195No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTTCAGAACGCGGCAAATGG640.1846988542899195No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTTGGCCTCAGTTTCCCCTCC640.1846988542899195No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTGTAGAACCATGTCGTCAGAGGT630.18181293469163948No Hit
CATAGATGATGTGAAAAGGACCCATGGCCTCAGTTTCCCCTCCTTCTATG630.18181293469163948No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACTTGGCCTCAGTTT610.1760410954950795No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAACACTCAAAACAG600.17315517589679952No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA600.17315517589679952No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA580.16738333670023953No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA570.16449741710195953No Hit
CATAGATACGATCATAAGGGTGGGGCCAGACATAGTGGCTTACACCATCA550.15872557790539954No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTACGGTAGCAAAGCTGCTATGGGA540.15583965830711954No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG520.15006781911055958No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACTTGGCCTCAGTTTCCCCTCCTT500.1442959799139996No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTGCCCCCAGTGTCTTCAGAAC500.1442959799139996No Hit
CATAGACTGGCGGTGATTGCTTTCCTGAGACTTGGCCTCAGTTTCCCCTC490.1414100603157196No Hit
CATAGATTAGGGGTGACGGACTAGCCCTTGGCCTCAGTTTCCCCTCCTTC480.13852414071743963No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTT480.13852414071743963No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTA480.13852414071743963No Hit
CATAGAGTGGGGGACTAGCATTGATTACCACTTAGGTTTGGGTATCCTTT470.13563822111915963No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGACACTGGGGGCACAAAGTT460.1327523015208796No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCCGGATTCAAGCAATTCTTCTAT460.1327523015208796No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAAGCTGCTATGGGATC460.1327523015208796No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAGCCATGCTGAAGTCCCATGATCTA460.1327523015208796No Hit
CATAGATGATGTGAAAAGGACCCATGGAAAGGCCCACATGACTCATGCTT450.12986638192259964No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA450.12986638192259964No Hit
CATAGACCTGACCTCATGATCTGCCTTCAGAACGCGGCAAATGGTCTATG440.12698046232431964No Hit
CATAGATTAGGGGTGACGGACTAGCCTACGGTAGCAGAGACTCAGTCTGC430.12409454272603966No Hit
CATAGATACGATCATAAGGGTGGGGCTTGGGGCCTAGAAAGTTATCCTGA420.12120862312775967No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCGCAGAGACTTGGCCTCAGTTTCCC420.12120862312775967No Hit
CATAGACCAGCTTTGCATGAGTGTGGGCCAGGCACAGTGGCTCATGTGTG420.12120862312775967No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAAGCTGCTATGGGATCTT400.11543678393119967No Hit
CATAGATGATGTGGCATGGAGAAGGGTCTATGTGTAGAACCATGTCGTCA400.11543678393119967No Hit
CATAGACTTTTCCTCCAATATAGCTGCACACTACAATTACAGTACTAGAT390.11255086433291969No Hit
CATAGATTAGGGGTGACGGACTAGCCAGACACTGGGGGCACAAAGTTCTA390.11255086433291969No Hit
CATAGATGTGAGCACTACTGATAATCCCTGTGCTTTGAGAGGCTGAGGTG380.1096649447346397No Hit
CATAGACCAGCTTTGCATGATGTGGCATGGAGAAGGGTCTATGTGTAGAA380.1096649447346397No Hit
CATAGATGGTGGGTTCTGGAGAGAGACACTGGGGGCACAAAGTTCTATGT380.1096649447346397No Hit
CATAGACCTGACCTCATGATCTGCCTCTCAATTATTCATCTCAACATGCA380.1096649447346397No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGAGAAAACTACCCCAGGCTC380.1096649447346397No Hit
CATAGATTAGGGGTGACGGACTAGCCCTAATCATGGGCAGTAGATGATGC380.1096649447346397No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA370.10677902513635969No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA370.10677902513635969No Hit
CATAGACCTGACCTCATGATCTGCCTACACTGATGTGGCATGGAGAAGGG370.10677902513635969No Hit
CATAGACCAGCTTTGCATGAGTGTGGTGGTGTGTGCCTGTGGTCCCAGCT360.1038931055380797No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTTGAGGTAAAACT360.1038931055380797No Hit
CATAGACACCTTGTATATGCCAGGACTATGGTAGCAGAGACTTGTCTCAT360.1038931055380797No Hit
CATAGACCTGACCTCATGATCTGCCTCCCGGATTCAAGCAATTCTTCTAT350.10100718593979972No Hit
CATAGACTTCTGTTTGGTCACATGCTCAGTGGCTCAGACCTGTAATCCTA350.10100718593979972No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)