FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806539

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806539
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences94384
Sequences flagged as poor quality0
Sequence length150
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1016110.765595863705713No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA49285.221223936260383No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG42004.449906763858281No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA37914.01657060518732No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT33053.5016528225122903No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA31143.2992880149177823No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT19342.049076114595694No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA17871.8933293778606544No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA16761.7757246991015427No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA16441.7418206475673843No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC12971.3741735887438549No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG12871.3635785726394303No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA12091.2809374470249195No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC11501.218426852008815No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA10991.16439226987625No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT10921.156975758603153No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT9420.9980505170367859No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC9020.955670452619088No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG8800.9323614171893542No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA8350.8846838447194441No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA7810.8274707577555518No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAACAGAGAAGTCAAGAGGAAA7510.7956857094422783No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT7360.7797931852856417No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG6890.7299966095948466No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT6610.700330564502458No Hit
CATAGAGCCTCCACTCTTCTCGCTATCTACGGAGATAGAGAGGTTGGTTC6430.681259535514494No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGACCAAAGCTAGAAACTCCCAT6430.681259535514494No Hit
CATAGAGCCTCCACTCTTCTCGCTATCCCCCATGTCCAGTGAACTCAAGG6110.6473554839803356No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT6010.6367604678759112No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTCTTGTAGAAGGGATGGTCT5970.6325224614341414No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA5440.5763688760806917No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTCACACACAGACCAAAGCTAGAA5330.5647143583658247No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG5080.5382268181047635No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAAGAACATTAGCTTAGTTAATTA5010.5308103068316664No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG4940.5233937955585692No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC4850.5138582810645873No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT4840.5127987794541448No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACCAAGTACGGAGATAGAGAGG4680.4958467536870656No Hit
CATAGATGCTTCTGATATGTTGCCGTAGAACATTAGCTTAGTTAATTAGG4630.49054924563485336No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC4500.47677572469910157No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA4320.4577046957111375No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGCAGCAACAAAAGTCACT4260.4513476860484828No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG4090.43333615867096115No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG4040.4280386506187489No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT3670.3888370910323784No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACATAGAACAGCTAAAAATCTTGG3650.38671808781149347No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT3450.3655280556026445No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTAGACCAAAGCTAGAAACTCCC3380.3581115443295474No Hit
CATAGATGTGGTCTCAGTGCCCTATGTACGGAGATAGAGAGGTTGGTTCT3250.34433802339379554No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC3200.33904051534158336No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT3080.32632649601627395No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACATTGGGGATGGCTGGTTGA3030.3210289879640617No Hit
CATAGATGTGCCACATACCTTTCCCAGGTGCAAATTGTCAGTGTGTCTAT3000.3178504831327344No Hit
CATAGACTCTGTTTTGCTACCTGGGGGTCATTCTTCTCTGGGGGCTCTAT2900.3072554670283099No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATACAGTGAAACAAGATC2890.3061959654178674No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGAACAGCTAAAAATCTTGGAGCT2870.30407696219698255No Hit
CATAGAAGTGACCCTCAGCTCAGTGACGGAGATAGAGAGGTTGGTTCTAT2860.3030174605865401No Hit
CATAGACCTGTGTGTGAGGCATTGTTGACTTGGTGGAGGGCTTTGCTGTT2850.3019579589760976No Hit
CATAGACAGCTGGGGTGGGAGGTTAGACACTGACGACATGCACATCTACA2790.29560094931344294No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCGTATGCAGCAACAAAAGTCACT2790.29560094931344294No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA2740.2903034412612307No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA2730.28924393965078826No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTGGTCATTCTTCTCTGGGGGCT2680.283946431598576No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGTCATTCTTCTCTGGGGGCTCT2660.28182742837769115No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2630.2786489235463638No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCACAGTGAAACAAGATCGTGCC2540.26911340905238174No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2540.26911340905238174No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT2540.26911340905238174No Hit
CATAGAGAACAGCCCTGAGAGAATGCTACAGGTGCAAATTGTCAGTGTGT2500.26487540261061193No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTGGGGAAAGAGAGCACTCTAT2470.2616968977792846No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG2430.2574588913375148No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT2390.25322088489574507No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCGGTCATTCTTCT2370.25110188167486014No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG2310.24474487201220546No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGTCATTCTTCTCTGGGGGCTCT2230.23626885912866588No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAGGAGAGGAGGGGGCAGA2220.23520935751822342No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGTGTGAGAGGGAAGGACTCTAT2210.23414985590778098No Hit
CATAGAATACAACACACTCTCTGCCCTGCATAGAACAGCTAAAAATCTTG2200.23309035429733854No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCAGTTGTGTGTGTGGTCT2190.23203085268689608No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTCTACACATAGAACAGCTAAAAAT2130.2256738430242414No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG1950.2066028140362773No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA1950.2066028140362773No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1890.20024580437362263No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1880.19918630276318022No Hit
CATAGATGTGGTCTCAGTGCCCTATGAACAGTGAAACAAGATCGTGCCTC1820.19282929310052552No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGGGTAATGGAGGAGTATGG1810.19176979149008305No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTAACTTCATAGCACATCATG1780.1885912866587557No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1710.1811747753856586No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATCTACAAGGACACTCATCTAT1700.18011527377521613No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATAGACATGTGTGAGAGGG1640.17375826411256146No Hit
CATAGAGAACAGCCCTGAGAGAATGCCACATAGAGAACAGCTAAAAATCT1630.17269876250211902No Hit
CATAGATGCTTCTGATATGTTGCCGTTCTGATATGTTGCCTTTCCTCAGT1610.17057975928123412No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT1610.17057975928123412No Hit
CATAGAATACAACACACTCTCTGCCCTGCACGGACTACAAGTACCCACCA1600.16952025767079168No Hit
CATAGAATACAACACACTCTCTGCCCTGGAGAACAGCTAAAAATCTTGGA1580.16740125444990678No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG1530.16210374639769454No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA1510.15998474317680964No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA1480.1568062383454823No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATCCTTGGAGAGAAATGC1460.1546872351245974No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1400.14833022546194272No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTGGGGGCTCAGGACACTTTG1350.14303271740973045No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA1290.13667570774707577No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGAATGGAGGCCAAATGGCACATCA1270.13455670452619087No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACTGGAGAGGAGGGGGC1240.13137819969486353No Hit
CATAGATGCTTCTGATATGTTGCCGTATGTTGCCTTTCCTCAGTTCTTTT1220.12925919647397863No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT1210.1281996948635362No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA1200.12714019325309373No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACACGGACTACAA1180.12502119003220885No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAACAGCTAAAAATCTTGGAGCT1170.1239616884217664No Hit
CATAGAGAACAGCCCTGAGAGAATGGGTTCTACACATAGAGAACAGCTAA1170.1239616884217664No Hit
CATAGATGTGGTCTCAGTGCCCTATGACAGTGAAACAAGATCGTGCCTCT1160.12290218681132395No Hit
CATAGATGCCTCAAAGAGCTGAAGACAACGACATGGTTCTACACATAGAT1120.11866418036955416No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACACGGACTACAAGT1120.11866418036955416No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1120.11866418036955416No Hit
CATAGAGAACAGCCCTGAGAGAATGAGAACAGCTAAAAATCTTGGAGCTC1110.11760467875911171No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA1100.11654517714866927No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1100.11654517714866927No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCTCCCTCATTATCCCTGT1090.1154856755382268No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTACACATAGAGAACAGCTAAAAA1080.11442617392778437No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC1060.11230717070689947No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA1050.11124766909645703No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1050.11124766909645703No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG1000.10595016104424479No Hit
CATAGAAGGAGCTGGACTGGATGGACGGATGGAGGGGGAGAGGAGGGGGC990.10489065943380232No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC970.10277165621291745No Hit
CATAGACCTGTGTGTGAGGCATTGTTCATAGAACAGCTAAAAATCTTGGA970.10277165621291745No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAAGCTCTGCCTCCTGGGTTCACAC950.10065265299203255No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGACAGCCGCTCACCTCTATGAGA950.10065265299203255No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)