FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806541

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806541
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108673
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA56295.179759461871854No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG52264.808922179382183No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA46064.238403283244228No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT41683.835359288875802No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT31432.8921627267122467No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG26732.4596725957689585No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC25682.3630524601326917No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA23902.1992583254350206No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA21651.9922151776430208No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT19781.82013931703367No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG19221.7686085780276612No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA17911.6480634564243188No Hit
CATAGATCATGGGACTTCAGCATGGCTCACACCTATAATCCCATCTATGA16281.4980721982461145No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA13161.210972366641208No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG13121.2072915995693503No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG11911.0959483956456526No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT11191.0296945883522126No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG10931.005769602385137No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT10800.9938071094015992No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTAACTTCATAGCACATCATG10720.9864455752578837No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA9740.8962667819973683No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT9670.8898254396216172No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT9590.8824639054779015No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC9510.875102371334186No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGAACATTAGCTTAGTTAATTAG9320.8576187277428615No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGGCTCAC8580.7895245369134928No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG8210.7554774414988084No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT7690.7076274695646573No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG7560.6956649765811196No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC7270.6689794153101506No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTGCCTGTTCACTCTGATGGTAC7260.6680592235421862No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTGGTCATTCTTCTCTGGGGGCT7240.6662188400062573No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA6940.638613086967324No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACATAGACATGTGTGAGAGGGAAG6770.6229698269119285No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCATAGAACAGCTAAAAA6670.6137679092322841No Hit
CATAGAACATCTACAGAACTCTCTACCCACACGGACTACAAGTACCCACC6430.5916833068011373No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTACCGAGCAAACTAACACAGA6250.5751198549777774No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA6140.5649977455301685No Hit
CATAGACGGGCCAGAGAATAGTGCTAGAATTTGCAAATACAGAATCAGTG5910.5438333348669863No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACATAGAACAGCTAAAA5890.5419929513310574No Hit
CATAGATGATCCATCTACCTCTGCTTCAACACGGACTACAAGTACCCACC5710.5254294995076975No Hit
CATAGATGCTTCTGATATGTTGCCGTGTTGCCTTTCCTCAGTTCTTTTTC5620.5171477735960174No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC5480.5042650888445152No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC5420.4987439382367285No Hit
CATAGAAGGAGCTGGACTGGATGGACTACATGTGTGAGAGGGAAGGACTC5400.4969035547007996No Hit
CATAGACTCTGTTTTGCTACCTGGGGACTACAAGTACCCACCACCTCTAT4740.4361708980151463No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCACTGACGACATGGCTCACACC4510.41500648735196416No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA4480.4122459120480708No Hit
CATAGACGGGCCAGAGAATAGTGCTAGACACTGACGACATGGCTCACACC4460.4104055285121419No Hit
CATAGATGTGCCACATACCTTTCCCAACTTAGCAACCTGTACATTTCGTC4450.4094853367441775No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACGGACTACAAGTACCCACCAC4310.3966026519926753No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACACGGACTACAA4190.385560350777102No Hit
CATAGAATACAACACACTCTCTGCCCTGGCTCACACCTATAATCCCATCT4170.3837199672411731No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACTCGGCTGAGAAAGGAGGA4060.3735978577935642No Hit
CATAGACTCTGTTTTGCTACCTGGGGTACGGTAGCAAACTAACACAGAAA4020.3699170907217064No Hit
CATAGATGCTTCTGATATGTTGCCGTAGTCCAGTGAACTCAAGGGGGTCT4020.3699170907217064No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGAGACAGCCGCTCACCTCTATGA3980.36623632364984865No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT3900.3588747895061331No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGCTCACACCT3870.35611421420223976No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGCTCACACCT3810.3505930635944531No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA3630.3340296117710931No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT3520.3239075023234842No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT3380.311024817571982No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCAGTTGTGTGTGTGGTCT3360.3091844340360531No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCACACTGACGACATGGCTCA3270.3009027081243731No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGGCTCACA3260.29998251635640866No Hit
CATAGATGTGCCACATACCTTTCCCAGGTGCAAATTGTCAGTGTGTCTAT3250.29906232458844423No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG3240.29814213282047974No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG3240.29814213282047974No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG3200.294461365748622No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC3170.2917007904447287No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGGCTCACACCT3160.2907805986767642No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA3140.28894021514083534No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG3060.2815786809971198No Hit
CATAGATGTGCCACATACCTTTCCCATGTCGTGGAGAGGAGGGGGCAGAA3000.2760575303893331No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACATGGCTCACACCTATAATC2980.27421714685340426No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG2940.2705363797815465No Hit
CATAGATGGAAATTTTTGGCCAGGCGACACTGACGACATGGCTCACACCT2910.26777580447765315No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT2900.2668556127096887No Hit
CATAGATCATGGGACTTCAGCATGGCACACGGACTACAAGTACCCACCAC2860.26317484563783095No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT2710.24937196911836426No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGAACAGCTAAAAATCTTGGAGCT2650.2438508185105776No Hit
CATAGATGTGCCACATACCTTTCCCAGGGTGGGGAAAGAGAGCACTCTAT2590.23832966790279095No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGTCTCATACAGTGAAACAAGAT2580.2374094761348265No Hit
CATAGACTCTGTTTTGCTACCTGGGGGACTACAAGTACCCACCACCTCTA2570.23648928436686206No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA2560.2355690925988976No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGACCAAAGCTAGAAACTCCCATCT2530.2328085172950043No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGGCTCACACCTATAATCCCAT2490.22912775022314652No Hit
CATAGATGATCCATCTACCTCTGCTTCATGGCTCACACCTATAATCCCAT2480.22820755845518206No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT2410.22176621607943098No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG2400.2208460243114665No Hit
CATAGAACATCTACAGAACTCTCTACCCATCATGAGACCAAAGCTAGAAA2340.21532487370367984No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACATGTGTGAGAG2340.21532487370367984No Hit
CATAGAGAACAGCCCTGAGAGAATGCCACATAGAGAACAGCTAAAAATCT2300.21164410663182207No Hit
CATAGATGTGGTCTCAGTGCCCTATGTGACAGTGAAACAAGATCGTGCCT2280.20980372309589318No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG2250.20704314779199984No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT2240.2061229560240354No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGCTACCGTATGGTGGAGGGCT2220.20428257248810652No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAAGCTAGAA2220.20428257248810652No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2150.1978412301123554No Hit
CATAGAGAACAGCCCTGAGAGAATGCACTGACGACATGGTTCTACACATA2130.19600084657642652No Hit
CATAGATCATGGGACTTCAGCATGGCAAACTAACACAGAAACAGAAAACC2120.1950806548084621No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATCTACAAGGACACTCATCTAT2060.1895595042006754No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTAGGGTGGGGAAAGAGAGCA1960.18035758652103098No Hit
CATAGAGAACAGCCCTGAGAGAATGCCATGGTTCTACACATAGAGAACAG1860.17115566884138655No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACATGGCTCACAC1830.1683950935374932No Hit
CATAGAGAACAGCCCTGAGAGAATGGTTCTACACATAGAGAACAGCTAAA1800.16563451823359987No Hit
CATAGATGATCCATCTACCTCTGCTTCACACTGACGACATGGCTCACACC1760.1619537511617421No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGGCTCACACCTATAATCCCATC1590.14631049110634656No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCTATACTGACGACTGGCTC1580.1453902993383821No Hit
CATAGAAGGAGCTGGACTGGATGGACTACACTGACGACATGTGTGAGAGG1550.1426297240344888No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC1550.1426297240344888No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1550.1426297240344888No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGGTTCTGCACA1540.14170953226652433No Hit
CATAGAGAACAGCCCTGAGAGAATGCCATAGAGAACAGCTAAAAATCTTG1530.1407893404985599No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC1520.13986914873059544No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACATAGAGAACAGCTAAAAATC1470.13526818989077324No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACACTGACGACATGGCTCACACCT1400.12882684751502213No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG1370.1260662722111288No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCTACACATAGAGAACAGCTAAAA1360.12514608044316436No Hit
CATAGATTTGTGTGAGAAGGAGCAAGATCGTGCCTCTTGTAGAAGGGATG1350.1242258886751999No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGAAACAAGATCGTGCCTCTAT1350.1242258886751999No Hit
CATAGAATACAACACACTCTCTGCCCTGCACTGACGACATGGCTCACACC1310.12054512160334213No Hit
CATAGACCTGTGTGTGAGGCATTGTTGTGGTGGAGGGCTTTGCTGTTTCT1260.11594416276351992No Hit
CATAGAGAACAGCCCTGAGAGAATGCACTGACGACATGGCTCACACCTAT1230.11318358745962659No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAACAGCTAAAAATCTTGG1220.11226339569166215No Hit
CATAGACTCTGTTTTGCTACCTAGGGTGGGGAAAGAGAGCACTCTATGAG1220.11226339569166215No Hit
CATAGAAGGAGCTGGACTGGATGGAGACAGCCGCTCACCTCTATGAGACC1200.11042301215573325No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACATGGTTCTACA1190.1095028203877688No Hit
CATAGATGCCTCAAAGAGCTGAAGACACACTGACGACATGGCTCACACCT1180.10858262861980436No Hit
CATAGATCGGTAAGGAATTTGGCTCGAGGCAGAGGACAGGTATCTATGAG1180.10858262861980436No Hit
CATAGAGGCAGGTGGGTAGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG1170.10766243685183992No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA1140.10490186154794659No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC1130.10398166977998215No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGACGACATGGCT1110.10214128624405326No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTTTCCTCAGTTCTTTTTCTAT1090.10030090270812438No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGAGACAGCCGCTCACCTCTATG1090.10030090270812438No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)