FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806546

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806546
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36966
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1951552.79175458529459No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA12693.432884272033761No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG10092.729535248606828No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG7652.0694692420061678No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT5301.4337499323702863No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC4671.2633230536168372No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG3460.9359952388681491No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG3320.8981225991451603No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT3250.879186279283666No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG1730.46799761943407453No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACTTGGCCTCAGTTTCCC1410.38143158578152897No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG1370.3706108315749608No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG1360.36790564302331874No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA1320.35708488881675055No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA1240.33544338040361416No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGATTACAAGTTCTATGTGTAGG1140.30839149488719364No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT1130.3056863063355516No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA1070.2894551750256993No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1040.2813396093707731No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTATGTGTAGAACCATGTCGTC1010.273224043715847No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA1000.270518855164205No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA940.2542877238543526No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA930.2515825353027106No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA900.24346696964778447No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC890.24076178109614238No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT870.2353514039928583No Hit
CATAGACCAGCTTTGCATGAGTGTGGAACACCAGTGTAGCAGACCATCTT860.23264621544121625No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA850.2299410268895742No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG840.22723583833793218No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG830.2245306497862901No Hit
CATAGATGTGAGCACTACTGATAATCCCTAGACTTGGCCTCAGTTTCCCC820.22182546123464805No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA810.219120272683006No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA810.219120272683006No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA790.21370989557972192No Hit
CATAGAGGGGAGACACTGGCTATAAGAAAGACACTGGGGGCACAAAGTTC770.2082995184764378No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA760.2055943299247958No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGACTTGGCCTCAGTTTCC750.2028891413731537No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTTTTAAAATGAGCACCT750.2028891413731537No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTGCATGACCTAGTGATTACCTGG720.19477357571822757No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA710.1920683871665855No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCAGTCTCCCAAAGTGCTGGG680.18395282151165937No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA680.18395282151165937No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAGAGAAAACTACCCCAGGCTC670.1812476329600173No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC660.17854244440837527No Hit
CATAGATGATGTGAAAAGGACCCATGGCGTCAGTGTACCAGTGTAGCAGA660.17854244440837527No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC590.15960612454688092No Hit
CATAGACCAGCTTTGCATGAGTGTGGTCAGTGTACCAGTGTAGCAGACCA580.15690093599523888No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT570.15419574744359682No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCACAGAGCCTTCAGGTCA570.15419574744359682No Hit
CATAGAAGAAAGTAGTACTCTCCTCATTCTTGAGAGAAAACTACCCCAGG550.14878537034031272No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA550.14878537034031272No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCCATGCTGAAGTCCCATGAT550.14878537034031272No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCACGCAGAGCCTTCAGGTCA530.14337499323702863No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA520.14066980468538656No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA430.11632310772060812No Hit
CATAGACACACCCAACTCTGCTCAGTGTACCTAGTGATTACCTGGGTGAT430.11632310772060812No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTTAGGTCA420.11361791916896609No Hit
CATAGATACGATCATAAGGGTGGGGCGTGGTCATGCACACCTGTGATCCT420.11361791916896609No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCAGCCTCCCAGATTGCTGGG410.11091273061732403No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAACCTTCAGGTCA400.10820754206568198No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA400.10820754206568198No Hit
CATAGATTAGGGGTGACGGACTAGCCATGCTGAAGTCCCATGATCTATGT380.1027971649623979No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG380.1027971649623979No Hit
CATAGACACCATTGGAGACCTGAGCACCTTCCACTCCAAAGCACAGTATC380.1027971649623979No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)