FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806552

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806552
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences135327
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG83576.175412149829672No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT61454.540852897056759No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT60604.478042075860693No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG51733.822592682908806No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT39822.942502235326284No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT39262.90112098842064No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT32852.427453501518544No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT32822.4252366490057415No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG32222.380899598749695No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG24961.844421290651533No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT24361.8000842403954866No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT20451.5111544628935836No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT15251.126900027341181No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT15151.1195105189651733No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC14531.0736955670339252No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG13921.0286195659402781No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT11930.8815683492577239No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG11450.8460987090528868No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT10950.809151167172848No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC10460.7729425761304101No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG10440.7714646744552085No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG10290.7603804118911969No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC10260.7581635593783945No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA10010.7396897884383752No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG9890.7308223783871659No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG9880.7300834275495651No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC9820.7256497225239604No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT9240.6827905739431156No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT9220.681312672267914No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT9150.6761400164047086No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT8130.6007670309694296No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT7870.5815543091918095No Hit
CATAGACAATTTCAGTGCGGCCGATGACACTGACGGCATTCTTTCTCCAG7680.5675142432773947No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA7410.5475625706621738No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG7360.54386781647417No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAGGTGGCTTCTGGTGCATCTA7320.5409120131237669No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT7260.5364783080981622No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT6990.5165266354829413No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC6640.49066335616691426No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC6440.4758843394148987No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC6240.46110532266288323No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG5580.41233456738123214No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT5470.4042061081676236No Hit
CATAGACAGGGGCCAGAACTCCTAAGAGACAGGGGTGTGGTGTTCTGTCT5470.4042061081676236No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG5450.4027282064924221No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC5380.39755555062921666No Hit
CATAGATGGCCCACTGACATTTTCCTGCTCACGATGGTATTACATGGTCT5260.3886881405780074No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCGTCAGTGTGCGTGTATGT5220.38573233722760425No Hit
CATAGATCTACTCCTACAATCTTGGCAAAGAAAGAAAACCCACAAAAGAC5140.37982073052679804No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT5070.3746480746635926No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT5020.37095332047558877No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT4920.363563812099581No Hit
CATAGACAATTTCAGTGCGGCCGATGCATTCTTTCTCCAGACCTTCATCT4830.356913254561174No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATGTTTGCTATTACGAGGATGCTC4820.3561743037235733No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAATGACAAGTGCACAGTTTG4760.35174059869796864No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT4690.34656794283476317No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT4480.33104997524514695No Hit
CATAGACGTGTGGTTGGGATGTCAGCTTGGTCTCATAGATGTGGTTGCAT4370.32292151603153846No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA4370.32292151603153846No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4280.3162709584931314No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT4210.31109830262992605No Hit
CATAGAACCAACCAATAATAATGTGCTTGTACACTGAACGAAATTTAGGT4200.31035935179232527No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT4060.3000140400659144No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTGCTTTTACAAACTCAAGT4060.3000140400659144No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA4010.29631928587791057No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC3960.29262453168990665No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT3920.2896687283395036No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG3780.27932341661309273No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTAGAATCTTGAACTCAGGAGTCT3770.27858446577549195No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC3710.2741507607498873No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTTTATGACAGACCAAGGTCAAGG3660.27045600656188346No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT3550.2623275473482749No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT3440.2541990881346664No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3400.25124328478426333No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGAAAGAAAACCCACAAAAGACG3400.25124328478426333No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA3330.24607062892105785No Hit
CATAGACTCAGAACTGGCTCTAATTCCTACGGTTGCAGGATGAATGGGGA3310.24459272724585632No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC3210.23720321886984858No Hit
CATAGAACTGACCATACACTTGCCCTAGTCTAGGATGAGATAATTGCCCT3090.22833580881863932No Hit
CATAGACCAGGACAATCACAGGGCATTCTTTCTCCAGACCTTCATCTATG2840.20986203787861993No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTTGCCAAGTAAGTC2840.20986203787861993No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT2770.20468938201541453No Hit
CATAGAACCAACCAATAATAATGTGCTTGTACGGTTGCAGGATGAATGGG2760.20395043117781372No Hit
CATAGAACTGACCATACACTTGCCCTTCCCAAGGTCAAGGGCAGGGATTC2750.20321148034021297No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGCCATCTATGCCAAGTAAGTCTAC2740.2024725295026122No Hit
CATAGAACTAGTTCCAGCACCACCAGGAGTTGACAAACGACAGCTTCTAT2730.20173357866501143No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT2710.20025567698980987No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG2710.20025567698980987No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTGCTTTTACAAACTCAAGTGAT2580.1906493161009998No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT2570.18991036526339902No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCAAGGTCAAGGGCAGGGATTCTA2560.18917141442579827No Hit
CATAGAAGAGAACCAAAAATGGACCCATTGCACAGGACATTGGGGAATTC2540.1876935127505967No Hit
CATAGAACTAGTTCCAGCACCACCAGCATTCTTTCTCCAGACCTTCATCT2510.18547666023779438No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC2480.18325980772499206No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTACATGTACACGGCA2480.18325980772499206No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA2380.17587029934898432No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAACCAAGGAGTTGACAAACG2360.17439239767378276No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC2320.17143659432337965No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT2230.1647860367849727No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC2220.1640470859473719No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCAGCTCCTCTTCTCTTCCCTCTAT2210.16330813510977116No Hit
CATAGAACATCTCCCTGTTCCTCCCACGGTTGCAGGATGAATGGGGACAT2200.16256918427217038No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA2200.16256918427217038No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG2140.1581354792465657No Hit
CATAGACAATTTCAGTGCGGCCGATGCATGTAGATGTGGTTGCATGGGGG2080.15370177422096107No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAAAGAAAGAAAACCCACAAAA2060.15222387254575953No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAAAGTGCACAGTTTGGAATGACTC2020.14926806919535643No Hit
CATAGACACTTGAAAGCTCCCTGGATCTATGTGTAGAACCATGTCGTCAG2020.14926806919535643No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAATGCCAAGTAAGTCTACAA2020.14926806919535643No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACCTGTGTGTGTAAGTGGGTCTAT1950.144095413332151No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG1910.14113960998174793No Hit
CATAGAACTCTTACCCTTTTGCCAGGAGTTGACAAACGACAGCTTCTATG1910.14113960998174793No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG1850.13670590495614326No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG1770.1307942982553371No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT1770.1307942982553371No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG1750.12931639658013552No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGATGCCATGCTGAAGTCCCATGA1730.12783849490493399No Hit
CATAGAAGAGAACCAAAAATGGACCCAAGGTCAAGGGCAGGGATTCTATG1710.12636059322973242No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT1700.12562164239213167No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACACTGACGCATTCTTTCTCCAG1630.12044898652892623No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA1630.12044898652892623No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGTCTGAAGAAAGAAAACCCACAA1600.11823213401612391No Hit
CATAGAGGCCATTCTTCTCATGCTGGAACACTGAACGAAATTTAGGTGAG1590.11749318317852313No Hit
CATAGATGGGTCCCATTCTGTTTGCATTGGTCTAGGATGAGATAATTGCC1450.10714787145211228No Hit
CATAGAAGGGGTGATGCTCTGATGGACACTTGAAAGCTCCCTGGATCTAT1390.10271416642650764No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTCTCCCTCTCTCACACATCTAT1380.10197521558890686No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATGTCCTCTTCACCTCCCAGATC1360.10049731391370531No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGGTCTCATAGACACTTGAAAG1360.10049731391370531No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)