FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806560

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806560
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences121986
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2342619.20384306395816No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT56424.625120915514895No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA44043.610250356598298No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA39843.26594855147312No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT35512.910989785713115No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA33422.7396586493532045No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG28522.3379732100404964No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC22361.832997229190235No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG19561.6034626924401159No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT16911.3862246487301821No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT16801.3772072205007133No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG16101.3198235863131835No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA14941.22473070680242No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA14581.1952191235059761No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA12371.014050792713918No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT12010.9845392094174741No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA10100.827963864705786No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA9700.795173216598626No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA8500.6968012722771466No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC8440.6918826750610726No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGCAACATATCAGAAGCATCTA7810.6402374042922958No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT7690.6304002098601479No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC7080.5803944714967291No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA7060.5787549390913711No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT6260.5131736428770515No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT6170.5057957470529405No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT5970.4894004229993606No Hit
CATAGACACAGGCCAATCTCAGCAGACCTTTTTCTGTAGTCAAGTGATCT5580.45742954109487977No Hit
CATAGATTCAACCAGCCATCCCCAATTACGGCAACATATCAGAAGCATCT5530.45333071008148473No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC5520.45251094387880575No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT5520.45251094387880575No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT5330.4369353860279049No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA5230.42873772400111493No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC5160.4229993605823619No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC5120.419720295771646No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT4890.40086567311002896No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT4890.40086567311002896No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG4610.3779122194350171No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGTAGCTTACACTGCACATGG4570.3746331546243012No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC4560.37381338842162215No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGAATGATATTGTTGCAGATTT4380.3590575967734002No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA4180.3426622727198203No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACACGGAAGACACAGCACACTCTT4090.33528437689570934No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGTAAGCTTACACTGCAC3980.32626694866624034No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG3920.3213483514501664No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGCAACATATCAGAA3880.31806928663945044No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA3690.3024937287885495No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGAGGAATCTTTGGGA3680.30167396258587054No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG3630.29757513157247556No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT3420.2803600413162166No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA3370.27626121030282164No Hit
CATAGATCCCATACTCCTCCATTACCCTACGGCAACATATCAGAAGCATC3360.27544144410014265No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGATAACGGCTTCCA3310.2713426130867477No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT3290.26970308068138965No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTGGGAAAGGTATGTG3290.26970308068138965No Hit
CATAGACACACTGACAATTTGCACCTGAAGCAGAGGTAGATGGATCATCT3290.26970308068138965No Hit
CATAGAGTCCTTCCCTCTCACACATGTCAACAATGCCTCACACACAGGTC3260.2672437820733527No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC3260.2672437820733527No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGTAGCAGAGACCTTTTTCTG3180.2606856524519207No Hit
CATAGAACCAACCTCTCTATCTCCGTAGTGATCTACAGTTTCAATACTAT3160.25904612004656274No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG3040.2492089256144148No Hit
CATAGACCACACACACAACTGAGAGTCAACAATGCCTCACACACAGGTCT3030.24838915941173575No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGCTCCTTCTCACACA2910.2385519649795878No Hit
CATAGATCCCATACTCCTCCATTACCCTGGGAAAGGTATGTGGCACATCT2870.2352729001688718No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT2870.2352729001688718No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGTGTCTTCAGCTCTTTGAGGCATC2760.22625547193940287No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGTTAATGGCTTCCA2600.21313921269653893No Hit
CATAGAAACAGCAAAGCCCTCCACCACTCTTGCTCCTTCTCACACAAATC2480.20330201826439098No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG2480.20330201826439098No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2470.202482252061712No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGAGGAGAATGATATTGTTGC2460.201662485859033No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG2350.19264505762956405No Hit
CATAGAGCAGCATTCTCTCAGGGCTGTTCTCTATGTGTAGAACCATGTCG2350.19264505762956405No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGTGTAGAACCATGT2330.19100552522420605No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT2310.18936599281884808No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT2300.18854622661616907No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGGCATTCTCTCAGGGCTGT2260.18526716180545308No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT2230.1828078631974161No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTTGAAGCAGAGGTAGATGGA2220.1819880969947371No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTACTTTTCTAATCAA2210.1811683307920581No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT2190.1795287983867001No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2130.17461020117062614No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTAACTTATCTGGGCACGGTGGTC2090.17133113635991015No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTAACCTCCCACCCCAGCTGTCT2040.16723230534651518No Hit
CATAGAGGCACAGGGATAATGAGGGAGATAACAATGCCTCACACACAGGT2000.16395324053579918No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG2000.16395324053579918No Hit
CATAGAAGTACCATCAGAGTGAACAGGCCACATAGATTTGTGTGAGGAGG1970.1614939419277622No Hit
CATAGAGGCACGATCTTGTTTCACTGTATATCTAGGAGTAGAACTGCTGG1940.15903464331972522No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1930.1582148771170462No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1900.15575557850900923No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG1860.15247651369829326No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTAGAACCATGTCGTCA1800.14755791648221928No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGGGTAGAGAGTTCTGTAGA1720.1409997868607873No Hit
CATAGAGCCCCCAGAGAAGAATGACCTCTAGCCAAATTCCTTACCGATCT1720.1409997868607873No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT1710.1401800206581083No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCAGGAGGAGCTGACTTACTGT1700.1393602544554293No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1690.1385404882527503No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGCCCCAGGTAGCAAAACAG1690.1385404882527503No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT1670.1369009558473923No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG1670.1369009558473923No Hit
CATAGAACCAACCTCTCTATCTCCGTAGGAATCTTTGGGAGGCTATTAGT1640.13444165723935533No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACACATAGACTCTGTTTACTCGGA1640.13444165723935533No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG1630.13362189103667635No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCAGGTAGCAAAACAGAGTCTATG1600.13116259242863937No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAGGAATCTTTGGGAGGCTATT1520.1246044628072074No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG1510.12378469660452839No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAACCAAAATGTCAGGGGA1480.12132539799649139No Hit
CATAGATCCCATACTCCTCCATTACCCTGTAGGAGGAGCTGACTTACTGT1480.12132539799649139No Hit
CATAGAGTCCTTCCCTCTCACACATGTTGGGAAAGGTATGTGGCACATCT1470.1205056317938124No Hit
CATAGATATTCTGCCCCCTCCTCTCCTCACTGAGCTGAGGGTCACTTCTA1450.11886609938845441No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1450.11886609938845441No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTTCTGTTTACTCGGAGATTTGACT1440.11804633318577543No Hit
CATAGATCCCATACTCCTCCATTACCCTCCTGCCTCTATGTGTAGAACCA1440.11804633318577543No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT1370.11230796976702245No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGTATATCTAGGAGTAGAACTGCTG1360.11148820356434345No Hit
CATAGACCACACACACAACTGAGAGTTGGTCTCATAGAGCCCCCAGGTAG1360.11148820356434345No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1350.11066843736166444No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT1320.10820913875362746No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1280.1049300739429115No Hit
CATAGAGGCACGATCTTGTTTCACTGTTCTCATAGGTCACTGACAGGTCT1260.10329054153755349No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTACGGCAACATATCAGAAGCATCT1220.1000114767268375No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1220.1000114767268375No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)