FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806564

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806564
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences112416
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2034418.09706803302021No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT53234.735091090236265No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA38223.399871904355252No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG37133.302910617705665No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA36613.2566538571021915No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT27332.431148590947908No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG26032.3155066894392258No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG19171.7052732707087959No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA13881.2346996868773128No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA13541.20445488186735No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT12871.1448548249359523No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT11901.0585681753487048No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA11511.0238756048961002No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT11060.9838457159123256No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA10270.9135710219185881No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT9680.8610873896954171No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT9580.8521918588101338No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT8970.797929120409906No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT8820.7845858240819813No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG8660.7703529746655281No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA8460.7525619128949615No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA8370.7445559350982066No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC8120.7223171078849986No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT8030.7143111300882437No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA7280.6475946484486194No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7260.6458155422715628No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA7060.6280244805009964No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT6990.6217976088812981No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA6910.6146811841730714No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT5440.48391688015940787No Hit
CATAGAAACAGCAAAGCCCTCCACCATAGAAACAACAATGCCTCACACAC5110.4545616282379732No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT5020.4465556504412183No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG4910.4367705664674068No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC4540.4038571021918588No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG4510.40118844292627387No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA4500.4002988898377455No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT4170.37094363791631085No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGTAGAACCATGTCGTCA3880.3451465983489894No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC3750.33358240819812124No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC3590.3193495587816681No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC3590.3193495587816681No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGCAGGGCAGAGAGTGTGTTGT3430.3051167093652149No Hit
CATAGACACACTGACAATTTGCACCTGTACGGCAACATATCAGAAGCATC3410.3033376031881583No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAAACATTGGAAAGATGGGGA3270.29088385994876176No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG3240.28821520068317674No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGGAGCTGACTTACTGTTCTATG3150.28020922288642186No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTAGGAATCTTTGGGAGGCT3120.2775405636208369No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTACCCCAGGTAGCAA2930.26063905493879874No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTGAGGAGAATGATAT2860.2544121833191005No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGCAACATATCAGAAGCATCT2850.25352263023057214No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA2830.2517435240535155No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGGCAACATATCAGAAGCA2800.24907486478793053No Hit
CATAGAGCCCCCAGAGAAGAATGACCTCTAGCCAAATTCCTTACCGATCT2770.24640620552234554No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2760.24551665243381726No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC2640.23484201537147734No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT2570.22861514375177913No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTTGCTCCTTCTCACACAA2560.2277255906632508No Hit
CATAGAGTCCTTCCCTCTCACACATGTGTAGTGGGAAAGGTATGTGGCAC2520.22416737830913747No Hit
CATAGAGGCACGATCTTGTTTCACTGTGTCTTCAGCTCTTTGAGGCATCT2380.21171363506974095No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC2360.20993452889268432No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACACTGAAGCAGAGGTAGATGGAT2350.20904497580415599No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2130.1894748078565329No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGCCCCAGGTAGCAAAACAG2080.18502704241389126No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA2010.178800170794193No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTACGGCAACATATCA1990.17702106461713635No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA1970.17524195844007973No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1970.17524195844007973No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAGAAGTGTATTAA1940.1725732991744947No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGACTCTGTTTACTCGG1930.17168374608596643No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC1890.16812553373185313No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1880.1672359806433248No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGCATT1870.16634642755479648No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTACCCCAGGTAGCAAA1850.16456732137773983No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1780.15834044975804154No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGAGGAGAATGATATTGTTG1780.15834044975804154No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA1690.15033447196128666No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTTGAAGCAGAGGTAGATGGA1650.14677625960717336No Hit
CATAGAAACAGCAAAGCCCTCCACCATAGCACCTTCCACTACCCACCTGC1650.14677625960717336No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA1650.14677625960717336No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA1600.14232849416453175No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGATTTCTATGTGTAGAACCATGT1590.1414389410760034No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGAGAAGTGTATTAATTA1590.1414389410760034No Hit
CATAGACGAATTGCCCATGTCAGTAAATCATAGACCTTTTTCTGTAGTCA1580.1405493879874751No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGAGAGGAATCTTTGGGAGGC1580.1405493879874751No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1570.13965983489894676No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGTTCACTACTAGCACTATTCTCTG1550.1378807287218901No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCGTCTGTTTACTCGGAGAT1540.1369911756333618No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT1530.13610162254483346No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT1490.1325434101907202No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGGAGGAGAATGATATTG1480.13165385710219188No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTAGAACCATGTTACGG1480.13165385710219188No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTACGATAGCGAGAAGAGTGGAG1440.12809564474807858No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCCAGGTAGCAAAACAGAGTCTAT1400.12453743239396527No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGGCATTCTCTCAGGGCT1380.12275832621690863No Hit
CATAGATATTCTGCCCCCTCCTCTCCAGGGCAGAGAGTGTGTTGTATTCT1320.11742100768573867No Hit
CATAGAGTCCTTCCCTCTCACACATGTGTAGAGTGATCTACAGTTTCAAT1310.11653145459721037No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACACATAGGAGGAGCTGACTT1300.11564190150868203No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1300.11564190150868203No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGGCAGAGAGTGTGTTGTATTCTATG1260.11208368915456873No Hit
CATAGAAGTACCATCAGAGTGAACAGGTCACTGACAGGTCTTAAAGCTCT1240.1103045829775121No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCGGTCACTGACAGGTCTTA1210.10763592371192714No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGCTCCTTCTCACACA1200.1067463706233988No Hit
CATAGAGTCCTAACCTCCCACCCCAGCTGTCTATGTGTAGAACCATGTCG1140.10140905209222886No Hit
CATAGACCATCCCTTCTACAAGAGGCACTCCTCTATGAGACCAAGTAGGA1130.10051949900370054No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)