FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806573

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806573
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69440
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3186045.88133640552996No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG35095.053283410138249No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT25313.6448732718894012No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA11761.6935483870967745No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC11671.6805875576036866No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG11381.6388248847926268No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG9841.4170506912442398No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT8531.2283986175115207No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT7141.028225806451613No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT4970.7157258064516129No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT4950.7128456221198157No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT4500.6480414746543779No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA4390.6322004608294931No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT3650.5256336405529953No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT3640.5241935483870969No Hit
CATAGAAAGTCTGGACCAAGTGCCTCCTGCATTCATTCTCCCTCCTGCCA3260.4694700460829493No Hit
CATAGACTTCAGCCCTCACAAGCCTTACACTGACGACATGGTTCCATGTG3070.44210829493087556No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT2940.4233870967741936No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACCGTATATGGAGGATGATC2680.3859447004608295No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT2610.3758640552995392No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG2600.3744239631336405No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT2560.3686635944700461No Hit
CATAGACACATGTAGGATGGGGTGGCTCTATGTGAGGTCAAGGTGGGAGG2420.3485023041474654No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGCCAGCAAG2290.3297811059907834No Hit
CATAGACACATGTAGGATGGGGTGGCATGCTATATTTAAGAAGAAGCAGG2230.32114055299539174No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG2130.3067396313364055No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA2050.2952188940092166No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT2020.29089861751152074No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC1880.2707373271889401No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1750.25201612903225806No Hit
CATAGAGGGTGCTCCTGTACTGGGTGTGCTGGGTAGTGGTAGTCTATGAG1670.24049539170506912No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG1510.21745391705069125No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAAATACAAAAATTA1490.214573732718894No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGACGACATG1490.214573732718894No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC1450.20881336405529954No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1410.20305299539170504No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1390.20017281105990783No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1390.20017281105990783No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCCACAAAAAATATAAAAATTAG1330.19153225806451613No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1330.19153225806451613No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATGAGGTCAAGGTGGGAGGAT1310.1886520737327189No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATATACAGATTAG1290.18577188940092165No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1260.1814516129032258No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1200.1728110599078341No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG1190.1713709677419355No Hit
CATAGAGGGTGCTCCTGTACTGGCTGTGCTGGGTAGTGGTAGTCTATGAG1160.16705069124423963No Hit
CATAGACACATGTAGGATGGGGTGGCTGTGCTGGGTAGTGGTAGTCTATG1130.1627304147465438No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1090.15697004608294932No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC1080.15552995391705068No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1030.1483294930875576No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1020.14688940092165897No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG990.14256912442396313No Hit
CATAGAGCAGACAAACTTGCAAAAGACTACACTAACCACCTATCTACCCC980.1411290322580645No Hit
CATAGACACATGTAGGATGGGGTGGCTCCTGTGCTGGGTAGTGGTAGTCT970.1396889400921659No Hit
CATAGACTTCAGCCCTCACAAGCCTTCCAGATGAAAGTCATTTGTTCTCT970.1396889400921659No Hit
CATAGATCCACAAAGACCAAGAGTGTCAATAAACCATGTTATAAAAGGCA960.1382488479262673No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG960.1382488479262673No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG950.13680875576036866No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC940.13536866359447006No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA920.1324884792626728No Hit
CATAGACTGGTCTCGAACTCCCAACCTCAGGGTGATCTGCCCACCTTTGC880.12672811059907835No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAATATACAAAAATTAG850.12240783410138248No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC830.11952764976958526No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACTTGTAATCCCAGCGTTTT820.11808755760368662No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT760.10944700460829493No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC750.10800691244239632No Hit
CATAGAGATAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT750.10800691244239632No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA720.10368663594470047No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG700.10080645161290322No Hit
CATAGAAAGTCTGGACCAAGTGCCTCACAGTTCATTGTATTCTCTATGAG700.10080645161290322No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)