FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806574

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806574
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69440
Sequences flagged as poor quality0
Sequence length150
%GC49

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3234546.57978110599078No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG35895.168490783410138No Hit
CATAGACTACCACTACCCAGCACAGCTACTTCTCTATGCACTTTGCCACA25063.6088709677419355No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG18612.680011520737327No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT12321.7741935483870968No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG10951.5769009216589862No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT8911.2831221198156681No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG8321.19815668202765No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC7181.0339861751152073No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT5040.7258064516129032No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC4620.6653225806451613No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA4490.6466013824884793No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGCA3990.5745967741935484No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCAAAGGTGAAGCAAA3190.459389400921659No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG2980.429147465437788No Hit
CATAGAACATCGCACACACATGGAACCATGTCGTCAGTGTAAGGCTTGTG2870.41330645161290325No Hit
CATAGACCATCCTCCCACCTTGACCTATCCTCCCATCTCAAGTCTCACTC2750.39602534562211983No Hit
CATAGAAGCAGCATTGATCATCCTCCATATACGGTAGCATTTTAACACAG2680.3859447004608295No Hit
CATAGACCATCCTCCCACCTTGACCTCACATAGAGCCACCCCATCCTACA2610.3758640552995392No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGGGCTGGGATGACACGCA2580.3715437788018433No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT2370.3413018433179723No Hit
CATAGAGTTTTGTTCCCTTGCTGGCAGTGTACTCCTATGTAATGTCTTAT2360.33986175115207373No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG2230.32114055299539174No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG2190.3153801843317972No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGGACTACAGGTG2170.3125No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA2000.28801843317972353No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1700.24481566820276496No Hit
CATAGACTACCACTACCCAGCACACCCAGTACAGGAGCACCCTCTATGTG1660.2390552995391705No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG1590.2289746543778802No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1580.22753456221198154No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1500.21601382488479265No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGTG1480.21313364055299538No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1440.20737327188940094No Hit
CATAGACCATCCTCCCACCTTGACCTCATCCTCCCATCTCAAGTCTCACT1430.2059331797235023No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1400.20161290322580644No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACTCCTAT1400.20161290322580644No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTAGCTGGGACTACATGCG1340.19297235023041476No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1250.18001152073732718No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA1250.18001152073732718No Hit
CATAGACTACCACTACCCAGCACAGCCACCCCATCCTACATGTGTCTATG1240.17857142857142858No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGGGACTGTGCATG1200.1728110599078341No Hit
CATAGACTACCACTACCCAGCACAGCCAGTACAGGAGCACCCTCTATGTG1190.1713709677419355No Hit
CATAGAGGTGAGCGGCTGTCTCCACACGTCCGCGCAGAGCCTTCAGGTCA1170.16849078341013823No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1160.16705069124423963No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG1150.16561059907834103No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1140.1641705069124424No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1130.1627304147465438No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG1120.16129032258064516No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1110.15985023041474652No Hit
CATAGACTACCACTACCCAGCACAGGAGCCACCCCATCCTACATGTGTCT1020.14688940092165897No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCAAAAAAGAAGCAGG1000.14400921658986177No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATAATGACTAAGAGAACAA990.14256912442396313No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA980.1411290322580645No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGCTTACAGGTA950.13680875576036866No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA930.13392857142857142No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA930.13392857142857142No Hit
CATAGACCGGGGGTAGATAGGTGGTTAGTGTAGTCTTTTGCAAGTTTGTC910.13104838709677422No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG870.12528801843317972No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAACGCTGGGATTACAAGTG790.11376728110599077No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG780.11232718894009218No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG760.10944700460829493No Hit
CATAGACCATCCTCCCACCTTGACCTCCCGAGTAGCTGGGACTACAGGTG760.10944700460829493No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAGTCCGCGCAGAGCCTTCAGGTCA750.10800691244239632No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG740.10656682027649769No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAATGCTGGGATTACAGGCG730.10512672811059907No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA730.10512672811059907No Hit
CATAGACCATCCTCCCACCTTGACCTTCCCGGTAGCTGGGACTACAGGCA720.10368663594470047No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA720.10368663594470047No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA710.10224654377880185No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)