FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806575

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806575
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences173797
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA124157.143391427930286No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT120766.948336277381083No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA76854.421825463040214No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT63883.6755525124139083No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG59423.418931281897846No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG55763.208340765375697No Hit
CATAGATCATGGGACTTCAGCATGGCTCACACCTATAATCCCATCTATGA54903.158857747832241No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAACATTAGCTTAGTTAATTAGGGA44382.5535538588122924No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA42162.4258186274791855No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA41912.4114340293560876No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA37252.143305120341548No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA35762.057572915527886No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC27991.6104996058620116No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA25031.4401859640845354No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT23931.3768937323429058No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA23461.3498506878714822No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT18671.0742417878329313No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG15930.9165865924037814No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG15630.8993250746560643No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT15570.8958727711065209No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT14540.8366082268393585No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGGCTCAC14310.8233743965661088No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATGCAAACTAACACAGAAAC14300.8227990126411849No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC13770.7923036646202178No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG12490.718654522229958No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT12070.6944883973831539No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA11180.6432792280649263No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT11080.6375253888156873No Hit
CATAGATGCTTCTGATATGTTGCCGTATATGTTGCCTTTCCTCAGTTCTT10300.5926454426716226No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG10100.5811377641731446No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC9960.5730823892242098No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA9830.5656023982001991No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCAGTTGTGTGTGTGGTCT9540.5489162643774058No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG8550.4919532558099392No Hit
CATAGATGTGCCACATACCTTTCCCAACACGGACTACAAGTACCCACCAC8460.48677480048562405No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA8380.4821717290862328No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGGCTCACACCTATAATC7940.45685483638958096No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC7890.45397791676496146No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG7690.4424702382664833No Hit
CATAGACTCTGTTTTGCTACCTGGGGTACGGAGATAGAGAGGTTGGTTCT7540.43383947939262474No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT7020.4039195152965817No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG6870.39528875642272304No Hit
CATAGAATACAACACACTCTCTGCCCTGCAGCAACAAAAGTCACTCCTCT6370.36651956017652776No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT6350.36536879232668No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACACACTGACGACATGGAGAC6060.34868265850388674No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCTACACATAGAGAACAGCTAAAA5990.3446549710294194No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC5850.33659959608048473No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG5580.32106423010753926No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC5530.31818731048291976No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGTGTAGAGGGTGGGGAAAGAGA5390.31013193553398505No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGTGTGAGAGGGAAGGACTCTAT5320.30610424805951775No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGAGAGGAGGGGGCAGAATA4990.2871165785370289No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG4990.2871165785370289No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGACGACATGGCT4990.2871165785370289No Hit
CATAGAGAACAGCCCTGAGAGAATGCTACACATAGAGAACAGCTAAAAAT4740.27273198041393115No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGCTGAGATTGGCCTGTG4530.26064891799052914No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG4370.2514427751917467No Hit
CATAGATGTGCCACATACCTTTCCCAGATCTCCCTCATTATCCCTGTGCC4350.2502920073418989No Hit
CATAGATGTGCCACATACCTTTCCCATCTATGAGACCAAAGCTAGAAACT4180.2405104806181925No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT4070.2341812574440295No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA4030.2318797217443339No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT3970.22842741819479048No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGATCTAAGGACACTTTGGACTCT3690.2123166682969211No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA3570.20541206119783426No Hit
CATAGAAGGAGCTGGACTGGATGGAGACAGCCGCTCACCTCTATGAGACC3560.20483667727291036No Hit
CATAGAAGTGACCCTCAGCTCAGTGACTCTCAGTTGTGTGTGTGGTCTAT3290.1893013112999649No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG3260.18757515952519319No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGGCTCACACCTATAATCCCATC3250.18699977560026926No Hit
CATAGAGAACAGCCCTGAGAGAATGCTAGAGAACAGCTAAAAATCTTGGA3210.18469823990057366No Hit
CATAGATGCTTCTGATATGTTGCCGTGTTGCCTTTCCTCAGTTCTTTTTC3190.18354747205072583No Hit
CATAGATGGAAATTTTTGGCCAGGTGCAAATTGTCAGTGTGTCTATGAGA3050.17549209710179117No Hit
CATAGAACTCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT3020.17376594532701944No Hit
CATAGAGAACAGCCCTGAGAGAATGAGAACAGCTAAAAATCTTGGAGCTC2860.16455980252823696No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG2790.16053211505376963No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC2730.1570798115042262No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA2620.15075058833006325No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGACAGCCGCTCACCTCTATG2410.1386675259066612No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTCACTGACGACATGGCTCACA2390.1375167580568134No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGAGACAGCCGCTCACCTCTATG2370.13636599020696558No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACATCATGTCTATGAGAC2300.13233830273249825No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTAACTTCATAGCACATCATG2240.12888599918295482No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA2130.12255677600879188No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTACACATGGAGACAGCCGCTCAC2100.12083062423402015No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA2020.11622755283462889No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT1980.11392601713493328No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC1960.11277524928508548No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCGAGGCAGAGGACAGGTATCT1880.10817217788569423No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAATCCTTCTATGAG1810.10414449041122689No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGCTCACACCT1780.10241833863645518No Hit
CATAGAGAACAGCCCTGAGAGAATGGTTCTACACATAGAGAACAGCTAAA1760.10126757078660736No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)