FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806576

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806576
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences173797
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA121236.975379321852507No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT116116.680782752291467No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT75534.345874784950258No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT61713.5506942007054203No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG58163.346432907357434No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG55563.196833086877219No Hit
CATAGATGGGATTATAGGTGTGAGCCATGCTGAAGTCCCATGATCTATGT53813.0961409000155355No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGCTCCTTCTCACACA44352.551827707037521No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT43452.5000431537943695No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA40082.306138771095013No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA37182.1392774328670807No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA34271.971840710714224No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA28691.6507764806066847No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA26091.5011766601264693No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT24221.393579866165699No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA24091.3860998751416882No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT17951.0328141452384103No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC16670.9591650028481504No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT15650.9004758425059122No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC15280.8791866372837276No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT14460.8320051554399674No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGACCTTTTTC13840.7963313520946851No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC13680.7871252092959027No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCATCTGTTTACTCGGAGAT13570.7807959861217397No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT12050.693337629533306No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT11820.6801037992600563No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG11810.6795284153351323No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT11430.657663826188024No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATACGGCAACATATCAGAAG10820.6225654067676657No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA10160.584590067722688No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT10070.5794116123983728No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC9790.5633008625005035No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG9640.5546701036266448No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTTGGGAAAGGTATGTGGCAC8520.4902271040351675No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG8410.4838978808610045No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT8050.4631840595637439No Hit
CATAGATGGGATTATAGGTGTGAGCCAGAAGTGTATTAATTATCTATGGC7680.44189485434155945No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC7670.4413194704166355No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA7540.43383947939262474No Hit
CATAGAACCAACCTCTCTATCTCCGTACCCCAGGTAGCAAAACAGAGTCT7100.40852258669597286No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG6740.3878087653987123No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT6400.3682457119512995No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT6190.3561626495278975No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAGCATTCTCTC6110.35155957812850624No Hit
CATAGAGGTGAGCGGCTGTCTCCATGTCGTCAGTGTGTACGATAGCGAGA6070.34925804242881064No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGGGCAGAGAGTGTGTTGTATTCT5980.3440795871044955No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG5720.3291196050564739No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC5470.3147350069333763No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTCAGCTCTTTGAGGCATCTAT5420.31185808730875675No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTACACATAGGAGGAGCTGACTTA5390.31013193553398505No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT5390.31013193553398505No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT5250.3020765605850504No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG4960.2853904267622571No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC4880.28078735536286586No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGCATTCTCTCAG4800.2761842839634746No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTACTTTTCTAAT4760.273882748263779No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCTGGGAAAGGTATGTGGCACA4460.25662123051606184No Hit
CATAGACACAGGCCAATCTCAGCAGAAGTGTATTAATTATCTATGGCTGC4350.2502920073418989No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG4310.24799047164220325No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC4110.23648279314372514No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA3980.22900280211971438No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG3960.22785203426986655No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGAAAGGTATGTGG3950.22727665034494265No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCAGTCCAGCTCCTTCTATGTGTAG3760.21634435577138847No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTAGATCTCCCCAGGTAGCAAAACA3630.20886436474737766No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA3480.20023360587351913No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCTTCAGCTCTTTGAGGCATC3370.19390438269935614No Hit
CATAGACCACACACACAACTGAGAGTCACTGAGCTGAGGGTCACTTCTAT3360.19332899877443224No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACACGGCAACATATCAGAAGCATC3360.19332899877443224No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGCATTCTCTCAGGGCTGT3270.18815054345011709No Hit
CATAGACACACTGACAATTTGCACCTGGCCAAAAATTTCCATCTATGTGT3150.1812459363510302No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA2950.16973825785255212No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCATTCTCTCAGGGCTGTTCTC2870.1651351864531609No Hit
CATAGAAGTACCATCAGAGTGAACCGGGCAGAGAGTGTGTTGTATTCTAT2730.1570798115042262No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT2610.15017520440513932No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG2570.1478736687054437No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG2550.1467229008555959No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGAGACCTTTTTCT2340.13463983843219388No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCCAGGTAGCAAAACAGAGTCTATG2310.13291368665742218No Hit
CATAGACATGATGTGCTATGAAGCAGAGGTAGATGGATCATCTATGTGTA2270.13061215095772655No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAATCTTTGGGAGGCTATTAG2240.12888599918295482No Hit
CATAGAGGTGAGCGGCTGTCTCCATGTGTAGGCATTCTCTCAGGGCTGTT2120.12198139208386795No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGGAGGAGCTGACTTACTGTTCTATG2120.12198139208386795No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT2070.11910447245924843No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT2050.11795370460940062No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC1930.11104909751031375No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATTCTCT1900.10932294573554205No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)