FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806580

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806580
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences109339
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA5208147.63259221320846No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA34493.1544096799860983No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA19161.752348201465168No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCGCCAC17851.632537338003823No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT14301.3078590438910178No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA13131.200852394845389No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA12051.1020770264955781No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA9500.8688574067807462No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT9330.8533094321330906No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTCTACT8470.7746549721508337No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGAAAG8120.742644436111543No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTTGTATATCT7450.6813671242649009No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA6070.5551541535956978No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT5120.46826841291762317No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT4350.39784523363118374No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGGTCAGGAGATTGAGACCATCCTG4100.3749805650316904No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG4000.3658346975918931No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG3940.3603471771280147No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA3720.3402262687604606No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGGTTGTCTGGGTGGTTTCT3550.32467829411280513No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAACCCCTTAAGAAAATTTAATTGT3520.3219345338808659No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA3130.28626565086565636No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA2950.26980308947402115No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG2890.26431556901014275No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCAC2840.2597426352902441No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCATGCTGAAGTCCCATGA2820.25791346180228464No Hit
CATAGAGGTGAGCGGCTGTCTCCACTAAAAATACAAAAATTAGCCAGGCA2700.24693842087452783No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCACCAC2660.2432800738986089No Hit
CATAGACTGTCATTGCTTGCCCATTGAACATAGCCTTTGGGGTTTCTATG2610.23870714017871025No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCTGCCAC2350.2149278848352372No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA2340.21401329809125746No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGTACCACAGGCATGTGCCAC2300.21035495111533853No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA2300.21035495111533853No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTAGCCATGCTGAAGTCCCAT2220.20303825716350066No Hit
CATAGAGGTGAGCGGCTGTCTCCATCACTTATACGCCTCCCTGTCTATGT2210.20212367041952095No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGCCATGCTGAAGTCCCATG2180.19937991018758172No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA2150.19663614995564255No Hit
CATAGAGCAGAAAACCTTTGAATAACAGACATAGAGCAGGAATTAGACTC2070.18931945600380468No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA2050.1874902825158452No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1970.18017358856400734No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTCAAA1910.17468606810012893No Hit
CATAGAGGTGAGCGGCTGTCTCCACTAAAAATACAAAAATTAGCCATGCT1860.1701131343802303No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG1830.1673693741482911No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTGCCAC1810.16554020066033162No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCAC1700.15547974647655455No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAGATCA1660.15182139950063564No Hit
CATAGAGCAGAAAACCTTTGAATAACAGATAGAGCAGGAATTAGACTCTT1610.14724846578073697No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1590.1454192922927775No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTAAGGCTGGCAAAGTTCCAA1580.14450470554879777No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGCGCATGCTTG1570.14359011880481803No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT1540.14084635857287883No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCAC1480.13535883810900046No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGCCCAGAAGAGGGTTGGGAATGGAT1400.12804214415716259No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA1390.12712755741318285No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA1380.12621297066920312No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG1380.12621297066920312No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAATTTGTTAAAAGAGG1340.1225546236932842No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCTGCCAC1220.11157958276552739No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCACAGAGCCTTCAGGTCA1170.10700664904562873No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCCATGCTGAAGTCCCATGATCTATG1170.10700664904562873No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGTGCAGAGCCTTCAGGTCA1140.10426288881368953No Hit
CATAGAGGTGAGCGGCTGTCTCCAACTTTGCCCCAAAAGAGGTTCTATGT1100.10060454183777061No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)