FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806585

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806585
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences187387
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA164168.760479649068504No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC118176.306200536856879No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC109885.863800583818515No Hit
CATAGACCACACCCAAACACCACGTATTCGCTCTGCGCCTCCAGAGCAGC93494.989140121780059No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC92864.955519859968941No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA74473.9741284080539203No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG68163.637392134993356No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA68003.6288536558032303No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG63823.4057858869612088No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA58753.135222827624115No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG46202.4654858661486654No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT40192.1447592415695858No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC34001.8144268279016151No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT31241.6671380618719547No Hit
CATAGAACAAGGCCAGAATTACCCTGATACCAACACAGATGCACACTGGG29671.5833542348188507No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT27901.4888973087780901No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT23381.247685271657052No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG18620.9936655157508258No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT15750.8405065452779541No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTGAGGCCTGAGATTGCTGCTATCT15340.8186266923532584No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT13850.7391121048952168No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC13780.735376520249537No Hit
CATAGATCTGTGGCTCCCGATAAATGTGATCTGAGCAAGGATAGCCCTCT13550.723102456413732No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG12730.6793427505643401No Hit
CATAGAACAAGGCCAGAATTACCCTGATAACAACACAGATGCACACTGGG12700.6777417857161916No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGGGACATGGATGAAGCTGG12590.6718715812729805No Hit
CATAGACTTGATGCCCAGGAAACCTCCAAGCCTTTCTGAAATCTTGGTTT12520.6681359966273007No Hit
CATAGATCTGTGGCTCCCGATAAATGTATTTCCTTTAGAAAAGCAATTCT11970.6387849744112452No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGGGTGGTCTTACTC11950.6377176645124796No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC10740.5731454156371574No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTTTAAAAATTTTTCTACAAC10480.5592703869532037No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC10190.5437943934211018No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT8630.4605442213173806No Hit
CATAGAGCTATCAGTATACTCCCACCATGACTCTTCACTATGTCATCTTA8420.4493374673803412No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG7970.42532299465811396No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACAACAACATCTATGAGACCAAG7600.4055777615309493No Hit
CATAGAGAAGAGAAGGCGACAATGGGACATGGATGAAGCTGGATCTATGA7520.4013085219358867No Hit
CATAGAACAAGGCCAGAATTACCCTGGAGACAGCCGCTCACCTCTATGAG7470.3986402471889725No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC6950.3708901898210655No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATCATGGTGGGTGCCTGA6830.36448633042847156No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGGGACATGGATGAAGCTGGATCTA6720.35861612598526044No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACACTCAGACATGTTTCC6420.3426064775037756No Hit
CATAGACAGCTCACAGACTGCATACTGGGAGAGGCTGTTTGAGATCTATG6280.335135308212416No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC5560.2967121518568524No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA5210.2780342286284534No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGGGACATGGATGAAGCTG5140.2742986439827736No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC5130.27376498903339075No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACCTTGAGGCTGCTTTTCTCT5120.27323133408400796No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGCTCATACAGAATTAGATC5040.2689620944889453No Hit
CATAGACAGCTCACAGACTGCATACTGCGTGAGTCTTGTCATTTAAAGTA5000.26682747469141405No Hit
CATAGAGAATTTGTACACCACGGGACATGGATGAAGCTGGATCTATGAGA4720.25188513610869484No Hit
CATAGATTCTCCCTTGTGCTTTTGGTATCATAGCTAAGAAAAAGTTGAGC4680.24975051631116355No Hit
CATAGACAGGAGGAGGAAGAAGAGGATCTATAGGGACATGGATGAAGCTG4260.22733700843708474No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC4230.22573604358893629No Hit
CATAGAGCTTCTTTCTGTTCATATTGAGGAATTCTTGCCAGGGATCTATG4140.2209331490444908No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTTATAGTCAAGGACTTTTAAG4080.21773121934819387No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT3960.21132735995559992No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACATAGAGCTGCTTTTCTCT3880.20705812036053728No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT3720.19851964117041204No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG3640.1942504015753494No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAATTCTTGCCAGGGATCTATG3520.18784654218275548No Hit
CATAGATGTCTCCCAGGCTAGAGTGCTCATACAGAATTAGATCTAGCTCT3520.18784654218275548No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA3310.17663978824571608No Hit
CATAGATGTCTCCTAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC3110.16596668925805955No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTGGGTGCCTG3050.16276475956176256No Hit
CATAGATCATGGGACTTCAGCATGGCGGGTGCCTGATTGTTCTATGAGAC2910.15529359027040296No Hit
CATAGACTTGATGCCCAGGAAACCTCTATGAGACCAAGTCTTGCTACACT2870.15315897047287164No Hit
CATAGAGCTATCAGTATACTCCCACCATGAGATTTTTAATATTCTAATAA2640.1408849066370666No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTTCTACACA2620.13981759673830094No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGTGGGCAACAGAACAA2580.13768297694076964No Hit
CATAGACCACACCTAAACACCACGTATTCGCTCTGCGCCTCCAGAGCAGC2560.13661566704200398No Hit
CATAGAGCTATCAGTATACTCCCACCATGGTGGGTGCCTGATTGTTCTAT2410.12861084280126156No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT2370.12647622300373026No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC2280.1216733284592848No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGTGGGT2240.11953870866175348No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACACTGACGACATGGTTCTA2010.10726464482594844No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACTCTTCACTATGT1990.10619733492718278No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAAGAGTGAGCCCTTGTCCCTTTCT1980.10566367997779996No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACACA1960.10459637007903431No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGTGGGCAACAGAACAACAACA1930.10299540523088582No Hit
CATAGAGCTTCTTCCTGTTCATATTGGGGAACAGAACAACAACATCTATG1920.10246175028150299No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTGGGTGCCTG1910.10192809533212015No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)