FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806586

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806586
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences187387
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT170809.114826535458704No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG138627.397524908344763No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA112195.9870748771259485No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG95615.102274971049219No Hit
CATAGATTTCTGTACCTCACTGCCGATTTCTGTATGCGGAGGTGGCGCAG94715.0542460256047645No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA74753.9890707466366395No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG71963.8401810157588305No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT70463.7601327733514065No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG65213.4799639249254213No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT59903.1965931468031403No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG47762.548736038252387No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT40812.1778458484313212No Hit
CATAGAGCAGCGTGTGTCCGTTAAAACATCAGCTAGAATCCTGTCACTTA40532.162903509848602No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA33731.800018144268279No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT27891.4883636538287075No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT23511.2546227859990287No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG20371.0870551318928208No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA17450.9312278866730349No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT16430.8767950818359864No Hit
CATAGATAGCAGCAATCTCAGGCCTCAGGTAAACAAACTTCTGGCCCTCT15650.8351699957841259No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT15170.8095545582137502No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA14050.7497852038828734No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG13980.7460496192371937No Hit
CATAGAGGGCTATCCTTGCTCAGATCACATTTATCGGGAGCCACAGATCT13820.7375111400470684No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGATGATTCAAGTTCAAGT13490.719900526717435No Hit
CATAGAGAAACTTTTAATAATGAAATACTGGGGGGAAATGACTGGTTTGC13140.7012226034890361No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTACCAAAAGCACAAGGGAGA12980.6926841242989108No Hit
CATAGACGGGAAGAGTAAGACCACCCTCATAGAGAAGCTTTGAGATTTGT12120.6467897986519876No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG10680.5699434859408604No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC10650.5683425210927119No Hit
CATAGATCAAGGTGTGAGCATGGTCCATTTCTGGTGAGGGCTCTCTTCCA10290.5491309429149301No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC9980.5325876394840624No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG9090.48509234898899073No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCATGGTGGGAGTATACTGAT8480.4525393970766382No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGGTAATTCTGGCCTTGTTCTATGTG7590.4050441065815665No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT7500.4002412120371211No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC7500.4002412120371211No Hit
CATAGAACAATCAGGCACCCACCATGATAGAGAAGCTTTGAGATTTGTGT6930.36982287992229984No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC6920.369289224972917No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA6750.3602170908334089No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTACTATGGCTTAATGTT6520.3479430269976039No Hit
CATAGATCTCAAACAGCCTCTCCCAGTATGCAGTCTGTGAGCTGTCTATG6400.34153916760500996No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA5630.3004477365025322No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCTCAAGGTGCCATACCAAGAATA5300.28283712317289883No Hit
CATAGAACAATCAGGCACCCACCATGGGTTTGGTATTTTGGAAATAGCCA5160.2753659538815393No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG5090.2716303692358595No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAGGTAAACAAACTTCTGGC5090.2716303692358595No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC4960.2646928548938827No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG4670.2492168613617807No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGCTGGAGTGCAGTGGCATGATCT4510.24067838217165546No Hit
CATAGACAAGCCTGCCAAGACCTCTCCTTAAACCAAAGGCAGTATTTTTT4420.23587548762720997No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG4380.23374086782967868No Hit
CATAGATCCAGCTTCATCCATGTCCCTATAGATCCTCTTCTTCCTCCTCC4260.22733700843708474No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT4160.22200045894325646No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTCTATGTTCCCCAATATGAACAG3960.21132735995559992No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC3900.20812543025930294No Hit
CATAGAGCAGCGTGTGTCCGTTAAAACATCAGCTGGAATCCTGTCACTTA3840.20492350056300598No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGCAAGGGTAC3710.1979859862210292No Hit
CATAGATCCCTGGCAAGAATTCCCCAATATGAACAGAAAGAAGCTCTATG3600.1921157817778181No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGTGACACCGAAAAA3190.17023592885312216No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGTAGCAAGACTTGGTCTCA3060.16329841451114538No Hit
CATAGAACAATCAGGCACCCGCCATGCTGAAGTCCCATGATCTATGTGTA2920.15582724521978578No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG2740.14622145613089488No Hit
CATAGATGTTGTTGTTCTGTTGCCCACATAGAGAAGCTTTGAGATTTGTG2610.13928394178891812No Hit
CATAGAACAATCAGGCACCCACCATGGTGGGAGTATACTGATAGCTCTAT2450.13074546259879288No Hit
CATAGAAAGGGACAAGGGCTCACTCTTCTGCTGCTCACTCTTTGGGTTCT2410.12861084280126156No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTATTTTTTCCTTTTTTTTCC2360.12594256805434742No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA2290.12220698340866762No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT2280.1216733284592848No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA2240.11953870866175348No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTAGAAGCTTTGAGAT1980.10566367997779996No Hit
CATAGATGTTGTTGTTCTGTTGCCCACAGGAAAGTTGGAACCTATCAGTG1890.1008607854333545No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACGTGGTGTTTGGG1880.10032713048397167No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)