FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806587

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806587
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences132180
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC101647.689514298683613No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC76575.792858223634438No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA73495.5598426388258435No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA68635.192162203056439No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT44653.3779694356180965No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA43773.311393554244212No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA39082.956574368285671No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA37232.8166137085792102No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA35312.6713572401270995No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT28092.125132395218641No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT23681.7914964442426993No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG23031.7423210773188078No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGACAATGGGCACACTTAACACC20921.58269027084279No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG20471.5486457860493268No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT17401.3163867453472538No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC17151.2974731426842185No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA17051.2899077016190044No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA16571.2535935845059767No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT14001.0591617491299743No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG13251.0024209411408687No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA12930.9782115297321833No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC12910.9766984415191405No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA12620.9547586624300197No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC10910.8253896202148584No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT10690.8087456498713875No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCAGCATGAGAAGAATGGCCTCT10480.7928582236344378No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT9980.7550310183083674No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA9460.7156907247692541No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG9310.704342563171433No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT8960.6778635194431835No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA8750.661976093206234No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT8490.6423059464366773No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG8270.6256619760932063No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG8100.6128007262823423No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC7830.5923740354062641No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA7150.5409290361628083No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG7050.5333635950975942No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA6430.4864578604932668No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG6260.47359661068240283No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT6030.45619609623241036No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT5730.43349977303676807No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA5590.4229081555454683No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA5550.4198819791193827No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCCCACAGCCCAGTTTTCCTTCT5230.3956725677106975No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA5130.3881071266454834No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT5000.3782720532607051No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT4960.37524587683461946No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT4800.3631411711302769No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA4590.3472537448933273No Hit
CATAGAATTCCCCAATGTCCTGTGCAGAATTCCCCTTTACCTACCTTCTC4580.3464972007868059No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC4220.3192616129520351No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGTGGTGAAAAGTAGGGGACAGT4050.30640036314117114No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAAGGGCAAGTGTATGGTCAGT3860.29202602511726433No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA3840.2905129369042215No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA3500.2647904372824936No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA3080.23301558480859436No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT3020.22847632016946587No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2910.22015433499773035No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGGTGGTGCTGGAACTAGTTCTA2910.22015433499773035No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA2740.2072930851868664No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTAGGAATTAGAGCCAGTTC2670.2019972764412165No Hit
CATAGACCCACTTACACACACAGGTTTTGGGGGAAGAGAAACAGAATCTA2640.1997276441216523No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC2640.1997276441216523No Hit
CATAGAAGGGCAATTATCTCATCCTAGACTAGAGGGCAAGTGTATGGTCA2570.19443183537600242No Hit
CATAGATGCACCAGAAGCCACCTACCCCTTTACCTACCTTCTCAGCTCTA2520.19064911484339536No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAAGTATATGACACATTA2440.1845967619912241No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGGATGACTTATGGAATCTGAA2430.18384021788470267No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA2420.18308367377818127No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATAGCCTTCTCTGATACCATCCC2260.1709789680738387No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA2050.15509154183688909No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTGAAGGGCAAGTGTATGGTCAG2040.15433499773036768No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT2020.15282190951732486No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT2000.15130882130428205No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGGAACAAGGGCATGGTCAAG1940.14676955666515357No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCACCCTTTTGCCAAGATTGTAGG1900.14374338023906794No Hit
CATAGATCATGGGACTTCAGCATGGCCTTGATCTAGCTTCGGAATGTTTT1810.13693448328037525No Hit
CATAGACCCCCATGCAACCACATCTATCCAGCATGAGAAGAATGGCCTCT1800.13617793917385385No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT1770.1339083068542896No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA1760.1331517627477682No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG1740.13163867453472536No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATTGGTGAAAAGTAGGGGACAGT1670.1263428657890755No Hit
CATAGATTGCCTCATTGTGCCAGACAATGGGCACACTTAACACCTCTATG1650.12482977757603268No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTAGGAGTTCTGGCCCCTGTCT1630.12331668936298985No Hit
CATAGATTGCCTCATTGTGCCAGACAGTGTAGGAAAATGTCAGTGGGCCA1610.12180360114994705No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1550.11726433651081858No Hit
CATAGATGCACCAGAAGCCACCTACCTGGCAAAAGGGTAAGAGTTCTATG1470.1112119836586473No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATTTGGGGGAAGAGAAACAG1460.1104554395521259No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA1460.1104554395521259No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA1400.10591617491299743No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG1370.1036465425934332No Hit
CATAGAGTCATTCCAAACTGTGCACTTTAGACCCCCCTTTACCTACCTTC1360.10288999848691179No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT1340.10137691027386896No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT1340.10137691027386896No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)