FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806595

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806595
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104657
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3150230.10023218704912No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG44534.254851562723946No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG32613.115892869086635No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA27662.6429192505040273No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA26002.484305875383395No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT20171.927248057941657No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA19691.8813839494730404No Hit
CNTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG19571.8699179223558862No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG18871.8030327641724873No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC14861.4198763580075868No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC14821.4160543489685353No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA12111.1571132365728045No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG7980.7624908032907498No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC7300.6975166496268763No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA6910.6602520614961255No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC5310.5073716999340704No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA5170.4939946682973905No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC4760.4548190756471139No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC4560.435709030451857No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT4530.4328425236725685No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCATTTCCCCTCTCTCTGAATAACT4430.42328750107494No Hit
CATAGATCATGCAAAGAACACAGGCCATGGGTCCTTTTCACATCATCTAT4180.3993999445808689No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGTTTTTCCAAATATAAG4050.386978415203952No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT3920.37455688582703495No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGAGGGAAGGAAGGGCAAACT3570.34111430673533544No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG3500.33442579091699554No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG3490.33347028865723266No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA3310.31627124798150147No Hit
CATAGAGGGGCATGCTGGATAAATCTACACTGAGCAGAGTTGGGTGTGTC3160.30193871408505885No Hit
CATAGATCATGGGACTTCAGCATGGCTAGTCCGTCACCCCTAATCTATGA3110.2971612027862446No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG2990.2856951756690905No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAATGAGGTC2860.2732736462921735No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC2850.27231814403241067No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA2670.2551191033566794No Hit
CATAGACCCTTCTCCATGCCACATCAGTGTAGCATGTTGAGATGAATAAT2450.23409805364189687No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGGAGGGAAGGAAGGGCA2300.21976551974545422No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGACGGAGTGAGGGCAGTAAGTCT2230.2130770039271143No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA2180.20829949262830008No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA2160.2063884881087744No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTTCTTATAGCCAGTGTCTCCCCT2100.20065547455019733No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGAGGGAAGGAAGGGCAAACTC2060.19683346551114594No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG2040.19492246099162025No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGGAAGGAAGGGCAAACTCTATGA2020.19301145647209456No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT1950.18632294065375465No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCATTTCCCCTCTCTCTGAAT1930.18441193613422896No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGTGCAGCTATATTGGAGGA1880.17963442483541475No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1850.1767679180561262No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGCATGTTGAGATGAATAAT1810.17294590901707482No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA1790.17103490449754913No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1780.17007940223778628No Hit
CNTAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG1740.16625739319873492No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTAGGCTAGTCCGTCA1720.16434638867920923No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCTCTCCAGAACCCACCATCTATGA1650.15765787286086932No Hit
CATAGATGTTAGGTGCTCATTTTAAAACATCAAGAATGAGGAGAGTACTA1650.15765787286086932No Hit
CNTAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA1640.15670237060110648No Hit
CATAGACCCTTCTCCATGCCACATCACCCAGCCTCTATTCACCAAGTCAC1600.1528803615620551No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAATCAATGC1570.15001385478276658No Hit
CATAGATCACCTACACAGACAGCTTTCCACACTCATGCAAAGCTGGTCTA1550.14810285026324088No Hit
CATAGATCACCCAGGTAATCACTAGGTATTAAACTTAGTACCCATTAGTT1540.147147348003478No Hit
CATAGATCATGGGACTTCAGCATGGCATTGATTCACCAAGTCACCCAGCC1540.147147348003478No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1540.147147348003478No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1530.1461918457437152No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGAGGGAAGGAAGGGCAAACTCT1430.13663682314608674No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAACCACTTGAACATTGCCTT1430.13663682314608674No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA1400.1337703163667982No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1380.1318593118472725No Hit
CATAGAGGGGCATGCTGGATAAATCTCACTGACGACATGGTTCTACACAT1360.12994830732774681No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCGGAGGGAAGGAAGGGCAA1330.1270818005484583No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG1330.1270818005484583No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT1290.12325979150940693No Hit
CNTAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA1290.12325979150940693No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGAAAGCAATCACCGCCAGTCTAT1280.12230428924964408No Hit
CNTAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG1280.12230428924964408No Hit
CATAGACCATTTGCCGCGTTCTGAAGGAAAGCAATCACCGCCAGTCTATG1250.11943778247035554No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC1230.11752677795082986No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGCAATCACCGCCA1220.11657127569106701No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1200.11466027117154132No Hit
CATAGATCTAGTACTGTAATTGTAGTGTGCAGCTATATTGGAGGAAAAGT1200.11466027117154132No Hit
CATAGATCATGGGACTTCAGCATGGCATGTTGAGATGAATAATTGAGACT1180.11274926665201562No Hit
CNTAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA1170.1117937643922528No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1150.10988275987272711No Hit
CATAGATGTGGCTATGCAGACTGAGTCCTGGCATATACAAGGTGTCTATG1130.1079717553532014No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGAGGGAAGGAAGGGCAAACTCTA1120.10701625309343855No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGCCCTGCG1100.10510524857391289No Hit
CATAGAGAGGTCGCCCAGGTATTTCTTATAGCCAGTGTCTCCCCTCTATG1100.10510524857391289No Hit
CATAGATGTGGCTATGCAGACTGAGTGGGGGCAGATTAACAGGTCATCTA1090.10414974631415004No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCCGATTTGGACCTGCG1090.10414974631415004No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGTGCAGAAAGGGATTCATCCAAGT1090.10414974631415004No Hit
CNTAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT1080.1031942440543872No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1050.10032773727509867No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCCAAGA1050.10032773727509867No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)