FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806601

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806601
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98378
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4116441.842688405944415No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG51295.213564008213218No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTAAAGTGCTGTACTT20602.0939640976641116No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA19131.9445404460346827No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT17231.75140783508508No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG12051.2248673483909005No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACCAAAAACAATACAAAAAT11751.1943727256093841No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC10871.1049218321169367No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG9540.9697290044522149No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT9400.9554981804875073No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA9300.9453333062270021No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTACCATATGGGCATTGCTCTTGAC8240.8375856390656448No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGGAGGATGATCAATGCTGCT7720.7847282929110166No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT6400.6505519526723454No Hit
CATAGAACCAAAAATGGCTAGGCATGTACACTGACGACATGGTTCTACAC5650.5743153957185549No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTGGAGGATGATCAATGCT5350.5438207729370388No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT5190.5275569741202302No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT4750.4828315273740064No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAATATACAAAAATTAG4610.4686007034092989No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT4550.4625017788529956No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG4520.459452316574844No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG4490.45640285429669236No Hit
CATAGAGCTATCTGGCAAAAACCCATCTAAAAAAATACAAACATTAGCCA4120.4187928195328224No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT3870.3933806338815589No Hit
CATAGACTTCAGCCCTCACAAGCCTTACACTGGGCATTGCTCTTGACATC3570.3628860111000427No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC3080.31307812722356626No Hit
CATAGAAAGTCTGGACCAAGTGCCTTACCTCAAATGCCAGGCTCTATGAG2970.30189676553701034No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGTATATTTTCTAAAGCCTGGGAT2970.30189676553701034No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG2780.28258350444205005No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTACAGGTCAAGGTGGGAGGAT2780.28258350444205005No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTTGGAGGATGATCAATGC2730.27750106731179736No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT2620.26631970562524143No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2620.26631970562524143No Hit
CATAGAGGTGTCCTTTCCCCACTTTACTCTGTATTTCTCCTTCCTGCCAT2580.2622537559210393No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAAATACAAAAATTA2320.23582508284372522No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT2280.23175913313952307No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC2200.22362723373111873No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC2200.22362723373111873No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA2080.21142938461851227No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG2060.2093964097664112No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCCGTAATCCCAGCACTTT2020.20533046006220904No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC1930.19618207322775416No Hit
CATAGAGGGTGCTCCTGTACTGGGTGATGAGGGTATAAGGTCTATGTCAT1910.1941490983756531No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATACAAAAATTAG1850.18805017381934985No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1830.18601719896724878No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC1820.18500071154119824No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1780.18093476183699608No Hit
CATAGATGAAAGACAAGCAGGGAAGCTGAAAATTCCAAAAAACAGAGCAC1760.178901786984895No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1750.17788529955884447No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA1710.17381934985464229No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT1660.1687369127243896No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT1640.16670393787228852No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG1600.16263798816808636No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1600.16263798816808636No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG1590.16162150074203582No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1550.15755555103783367No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT1530.1555225761857326No Hit
CATAGACTGGTCTCGAACTCCCAACCTCAGGGTGATCTGCCCACCTTTGC1520.15450608875968205No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGATTGCTATGTTGAAGA1470.14942365162942936No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT1460.14840716420337882No Hit
CATAGAGGTGTCCTTTCCCCACTTTACTCTGCACATCTCCTTCCTGCCAT1450.14739067677732826No Hit
CATAGAAAAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG1410.1433247270731261No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA1400.14230823964707556No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1380.14027526479497449No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACTAAAAACACAAAGATTAG1370.13925877736892395No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT1350.13722580251682287No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGCTTCTGTTTGCTTTGTTGAAGA1350.13722580251682287No Hit
CATAGAGCTATCTGGCAAAAACCCATCTTTACAAAATTAAAAAAATTAGC1330.1351928276647218No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1330.1351928276647218No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1250.12706092825631746No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC1240.12604444083026695No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG1220.12401146597816584No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1210.1229949785521153No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA1200.12197849112606476No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC1200.12197849112606476No Hit
CATAGATCATGGGACTTCAGCATGGCTGGCTGGGTGGCTTGGCAGGCTTG1190.12096200370001423No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGACGCAGGTCAAGGT1170.11892902884791316No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAATACAAAAATTAT1120.11384659171766046No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1110.11283010429160992No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTAGACCTGCG1100.11181361686555936No Hit
CATAGACACATGTAGGATGGGGTGGCTGAGGTCTGTTCGGCCACTCATGT1100.11181361686555936No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG1090.11079712943950883No Hit
CATAGACACATGTAGGATGGGGTGGCACATACCTGTGGTCCCAGCTACTT1080.10978064201345829No Hit
CATAGAGCTATCTGGCAAAAACCCATCTCTACAAAAAACAAAAAATTAGC1080.10978064201345829No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTTCTCCTCCAAAGGATTGCAGCTC1020.10368171745715506No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCCAGCACTTT1000.10164874260505398No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)