FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806602

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806602
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98378
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4103241.70851206570575No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG52005.285734615462807No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT20972.1315741324279815No Hit
CATAGACTACCACTACCCAGCACAGCTACTTCTCTATGCACTTTGCCACA20252.0583870377523428No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT19982.0309418772489782No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG19892.0217934904145234No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGCA12151.2350322226514059No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA9620.9778609038606192No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT9370.9524487182093557No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG9140.9290695074101932No Hit
CATAGAGATGTCAAGAGCAATGCCCATATGGTAGAGGCACTTGGTCCAGA7890.8020085791538758No Hit
CATAGAAGCAGCATTGATCATCCTCCAGCATTTTAACACAGCATTGAAGT7690.7816788306328651No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG6370.6475024903941938No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT6290.6393705909857895No Hit
CATAGAAGCAGCATTGATCATCCTCCAGCAGCATTTTAACACAGCATTGA5180.5265404866941795No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC5120.5204415621378764No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG4630.4706336782613999No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC4540.461485291426945No Hit
CATAGACCATCCTCCCACCTTGACCTATCCTCCCATCTCAAGTCTCACTC4460.45335339201854075No Hit
CATAGACCATCCTCCCACCTTGACCTCCCGAGTAGCTGGGACTACAGGTG4420.4492874423143386No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGGACTACAGGTG4040.41066092012441807No Hit
CATAGAGATGTCAAGAGCAATGCCCAGTGTAAGGCTTGTGAGGGCTGAAG3440.34967167456138565No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG3390.34458923743113296No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG2970.30189676553701034No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGGCTTGTGAGGGCTGAAGT2770.2815670170159995No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG2750.27953404216389843No Hit
CATAGACCATCCTCCCACCTTGACCTGTAGCAGAGGCACTTGGTCCAGAC2680.27241863018154466No Hit
CATAGAAGCAGCATTGATCATCCTCCAAGCAGCATTTTAACACAGCATTG2670.2714021427554941No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAAGGAAGCAAGCATATC2620.26631970562524143No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA2580.2622537559210393No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA2560.2602207810689382No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG2390.24294049482607902No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG2360.2398910325479274No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG2210.2246437211571693No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT2160.21956128402691658No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC2150.21854479660086604No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG2140.21752830917481553No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA2100.21346235947061332No Hit
CATAGATGACATAGACCTTATACCCTCATCACCCAGTACAGGAGCACCCT2030.20634694748825955No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA2010.20431397263615847No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACGGGCA1930.19618207322775416No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1900.19313261094960255No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA1880.19109963609750147No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGATCA1880.19109963609750147No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1840.18703368639329931No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTGGGATTACAGGTG1820.18500071154119824No Hit
CATAGAGGTGAGCGGCTGTCTCCACACGTCCGCGCAGAGCCTTCAGGTCA1740.17686881213279393No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1710.17381934985464229No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1700.17280286242859177No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1660.1687369127243896No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC1650.16772042529833905No Hit
CATAGAGTTTTGTTCCCTTGCTGGCAAGGAGCTGTGATCCTTCGGAGGAG1650.16772042529833905No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG1650.16772042529833905No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG1640.16670393787228852No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATCTTCAACAAAGCAAACA1620.16467096302018744No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG1590.16162150074203582No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATCTTCAACATAGCAATCA1570.15958852588993475No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCAAAAAAGAAGCAGG1560.15857203846388418No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG1550.15755555103783367No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT1510.15348960133363151No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTA1480.15044013905547987No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1480.15044013905547987No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGGGAAGCAAATCATGA1420.14434121449917664No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA1400.14230823964707556No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTTGCTGGGACCACAGGTG1340.13620931509077233No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1310.13315985281262072No Hit
CATAGACCATCCTCCCACCTTGACCTGCGTCATGAGCCACCATGCCCGGC1230.1250279534042164No Hit
CATAGACCATCCTCCCACCTTGACCTCCAAAGTAGCTGGGACTACAGGTG1230.1250279534042164No Hit
CATAGAAGGTGATAATCATGACAGCCAAACCAGCCAGCCAGCCAAGCCAC1180.1199455162739637No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1170.11892902884791316No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTGTTGGGATTATAGGCGT1160.11791254142186261No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA1160.11791254142186261No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTTGCTGGGACTACAGGCA1140.11587956656976153No Hit
CATAGACATGAGTGGCCGAACAGACCTCAGCCACCCCATCCTACATGTGT1100.11181361686555936No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAATTTCTGGGATTACAGGGG1090.11079712943950883No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG1080.10978064201345829No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTAGCTGGGTTTACACGTG1070.10876415458740776No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA1040.10571469230925613No Hit
CATAGACCATCCTCCCACCTTGACCTTCCCGGTAGCTGGGACTACAGGCA1020.10368171745715506No Hit
CATAGAAGCAGCATTGATCATCCTCCAGGCTGGAGTACAGTGGCGTGATC1020.10368171745715506No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTAGCTGGGACTACAGGCC1000.10164874260505398No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAATGCTGGGATTACAGGCG990.10063225517900343No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)