FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806603

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806603
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34497
Sequences flagged as poor quality0
Sequence length150
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG470913.650462359045715No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA22416.496217062353248No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG17365.032321651158072No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC16754.855494680696872No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC16294.722149752152361No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG11963.4669681421572887No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG11933.4582717337739517No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA10353.0002608922515No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG8182.3712206858567413No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA6141.7798649157897788No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT5931.7189900571064152No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT4701.36243731338957No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC4671.3537409050062323No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG4461.2928660463228687No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA4181.2116995680783835No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT4031.1682175261616952No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA3871.121836681450561No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT3811.1044438646838854No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT3290.953706119372699No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG3050.8841348523059976No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT2930.8493492187726468No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG2820.8174623880337419No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT1890.5478737281502739No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA1890.5478737281502739No Hit
CATAGATCACGTAGAAACTGGAGAGGCCAGTGCAGTGGGGAGGCAGGCTG1850.5362785169724904No Hit
CATAGACCCAGATGCTGTCCCACTAACTATAAGCCATAGGACAATGAATC1840.5333797141780444No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC1810.5246833057947068No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG1760.5101892918224773No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG1690.48989767226135605No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA1670.48410006667246425No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC1660.4812012638780184No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT1610.46670724990578893No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT1600.463808447111343No Hit
CATAGACAGTGCCTTTGTGCGTGTTAGGAGAGCTTCACAACCTTGAAAGG1580.4580108415224512No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG1350.39133837725019566No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT1320.382641968866858No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC1310.3797431660724121No Hit
CATAGACCCAGATGCTGTCCCACTAAACACTGACGCTATACCACACTACA1260.3652491521001826No Hit
CATAGACCGCTTCCCAATTTTTGTAACACACTGACGCTATACCACACTAC1150.3333623213612778No Hit
CATAGACTTGAAAGTGATAACTGAGAGGTAAACAAATGATTTTTCCACTA1130.327564715772386No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGTGTGCTTGAACCAGATTC1130.327564715772386No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCTGTTTCCCCACTCAAAT1120.3246659129779401No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAGTTCTGCTTGTGGTGAGTTGAC1090.31596950459460243No Hit
CATAGATCATGGGACTTCAGCATGGCCATAGAGATCCCACCATTTGCCAT1080.31307070180015656No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGGAGACAGCCGCTCACCTCT920.2666898570890222No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT910.26379105429457633No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGATCATTGTTCACT860.24929704032234687No Hit
CATAGACGGATTATTCTCTCCATGGTCTGAGGAGAATTCAAGCTGCTCTA830.2406006319390092No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA800.2319042235556715No Hit
CATAGACCAACATTTCTTCTCCCAGGGTATAAAGCTGGACCCTCTCTGGG760.22030901237788794No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA760.22030901237788794No Hit
CATAGATGGCCAAGATACGAGCACATAATAATTCTAACTCAGTCAAATTT750.21741020958344204No Hit
CATAGATCATGGGACTTCAGCATGGCCTCTCTTACCCTTCCCCACACCCT740.21451140678899616No Hit
CATAGATCATGGGACTTCAGCATGGCATTCCTGTCATTGTCGCTGTCCCA710.20581499840565845No Hit
CATAGATCATGGGACTTCAGCATGGCGAGAACGCTATACCACACTACACA670.1942197872278749No Hit
CATAGAGCTTGGGTGCGAACATCAACAAAACAAGGGGTAAGGCGTACTGG660.191320984433429No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTGTTGCTGAAGTGATGGGCTAGA650.18842218163898308No Hit
CATAGACCCAAGACCCCAGCCTTTACTGTCTGTTTCCCCACTCAAATACC650.18842218163898308No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGATCATTGTTCACTGC640.1855233788445372No Hit
CATAGATCATGGGACTTCAGCATGGCAGAGATCCCACCATTTGCCATCTA640.1855233788445372No Hit
CATAGATCATGGGACTTCAGCATGGCCATAGAGTGTCTGTTTCCCCACTC640.1855233788445372No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGGACCTAAGGCTGGTCTCAAA640.1855233788445372No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG620.1797257732556454No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTACACTGACGACATGGTTCTA600.17392816766675362No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC580.16813056207786184No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGGAGACAGCCGCTCAC570.16523175928341596No Hit
CATAGAGCTTGGGTGCGAACATCAACCCTCTCTTACCCTTCCCCACACCC540.15653535090007828No Hit
CATAGATCATGGGACTTCAGCATGGCCACATAGAGATCCCACCATTTGCC510.1478389425167406No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGGTGGAAGGGTAAGAGAGGGT510.1478389425167406No Hit
CATAGACCAGCAGACACTCCCATCATCTATGTGTACAAGGGGTAAGGCGT490.1420413369278488No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGACGCTATACCACACTA490.1420413369278488No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGATCATTGTTCAC470.136243731338957No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGAGAACAAGGGGTAAGGCGTA470.136243731338957No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA450.1304461257500652No Hit
CATAGACGGATTATTCTCTCCATGGTCTACACTGACGCTATACCACACTA440.12754732295561932No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGGAGACAGCCGCTCACCT430.12464852016117343No Hit
CATAGATCATGGGACTTCAGCATGGCACCTGACGACATGGTTCTACACAT400.11595211177783575No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGACGATCATTGTTCACT400.11595211177783575No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGACGACATGGTTCTACA400.11595211177783575No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC400.11595211177783575No Hit
CATAGACCGCTTCCCAATTTTTGTAACAAATGAGAAACCTGGATGCTTCT390.11305330898338986No Hit
CATAGAGAAGACTCCCTCAACCCACCATGGAGACAGCCGCTCACCTCTAT360.10435690060005218No Hit
CATAGATGTTTTATCAAAGGCATGCTCATGTACGCCTTCCCCACACCCTC360.10435690060005218No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGCTTCTTGTGGTAACTGGTC360.10435690060005218No Hit
CATAGAAAAAACAGTTGGCCAGGCATACGCTATACCACACTACACACTCT360.10435690060005218No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT350.10145809780560627No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGTGTGCTTGAACCAGA350.10145809780560627No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGCTGAAGTGATGGGCTAG350.10145809780560627No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTGGAGACAGCCGCTCAC350.10145809780560627No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)