FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806611

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806611
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences195665
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA2076310.611504356936601No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT180609.23006158485166No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA90274.613497559604426No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT76273.897988909615925No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG65883.366979275803031No Hit
CATAGATCATGGGACTTCAGCATGGCTCACACCTATAATCCCATCTATGA63573.248920348554928No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA62703.204456596734214No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG52092.662203255564357No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG50472.579408683208545No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA46342.3683336314619376No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA40282.0586206015383435No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC29911.5286331229397183No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA27111.3855313929420183No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT25371.2966038893005902No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA21581.1029054761965604No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG20571.0512866378759615No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA19891.0165333605908056No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG16890.8632100784504126No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG16890.8632100784504126No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG16720.8545217591291238No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT16390.8376561980936805No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT16030.8192574042368334No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT15280.7809265837017352No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGGCTCAC12780.6531571819180743No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT10350.5289653233843559No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT9430.4819461835279687No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA9270.47376894181381446No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG8920.45588122556410193No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA8630.44105997495719723No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA8300.42419441392175405No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATTTACTGACATGGGCAATTCG7870.4022180768149644No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT7510.3838192829581172No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC7320.37410880842255895No Hit
CATAGATGCTTCTGATATGTTGCCGTGATGCTCAGATCTCAAAAGGCTTC6780.34651061763728824No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG6570.3357779878874607No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC6510.33271152224465284No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG6360.3250453581376332No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA6210.31737919403061354No Hit
CATAGACAGCTGGGGTGGGAGGTTAGACCAAAGCTAGAAACTCCCATCTA6130.3132905731735364No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCAGTTGTGTGTGTGGTCT6030.30817979710219No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA5950.30409117624511284No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG5860.299491477780901No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA5710.29182531367388137No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT5370.27444867503130355No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG5180.26473820049574526No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG5120.26167173485293743No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA4980.2545166483530524No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGGCCTGTTCACTC4870.24889479467457135No Hit
CATAGAGAACAGCCCTGAGAGAATGCTATTGAGGGTAATGGAGGAGTATG4840.2473615618531674No Hit
CATAGATGCTTCTGATATGTTGCCGTACACACGGACTACAAGTACCCACC4750.2427618633889556No Hit
CATAGAACTCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT4460.22794061278205097No Hit
CATAGACCACCGTGCCCAGATAAGTTACACGGACTACAAGTACCCACCAC4430.22640737996064703No Hit
CATAGAACAGTAAGTCAGCTCCTCCTGTTCACTCTGATGGTACTTCTATG4320.22078552628216594No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTACGGTAGCACAACTGGCATCTGG4110.21005289653233844No Hit
CATAGACTCTGTTTTGCTACCTGGGGACTACAAGTACCCACCACCTCTAT4050.2069864308895306No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA3980.20340888763958806No Hit
CATAGACGGGCCAGAGAATAGTGCTAGATATGTTGCCTTTCCTCAGTTCT3960.2023867324253188No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT3890.1988091891753763No Hit
CATAGATGTGCCACATACCTTTCCCATCTATGAGACCAAAGCTAGAAACT3820.1952316459254338No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACGGACTACAAGTACCCAC3760.1921651802826259No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGGAGAGGAGGGGGCAGAATATC3680.18807655942554877No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGAACAGCTAAAAATCTTGGAGCT3660.18705440421127947No Hit
CATAGAATACAACACACTCTCTGCCCTGGAGTGCCTCTTGTAGAAGGGAT3570.1824547057470677No Hit
CATAGATGCCTCAAAGAGCTGAAGACACAGAACTTAGCAACCTGTACATT3490.17836608488999056No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAATTTGCAAATACAGAATCAGTG3460.17683285206858662No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC3420.17478854164004803No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGACAGCCGCTCACCTCTATGAGA3280.16763345514016303No Hit
CATAGATCACCCAGCCCATATTGCACCGTAAGACCAAAGCTAGAAACTCC3260.16661129992589374No Hit
CATAGAGAACAGCCCTGAGAGAATGCCATAGAGAACAGCTAAAAATCTTG3170.16201160146168195No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA3160.16150052385454733No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG3150.16098944624741265No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACGGACTACAAGTACCCAC3150.16098944624741265No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGGTGGAGGGCT3140.16047836864027804No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGGCTCACA3080.15741190299747015No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGGACACTTTGGACTCTGCCTCTA3070.1569008253903355No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATAGAACATTAGCTTAGTT3040.1553675925689316No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACACGGACTACAA2910.14872358367618124No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTCTCATAGACCAAAGCTAGA2850.14565711803337336No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAACAGCTAAAAATCTTGGAG2840.14514604042623871No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA2830.1446349628191041No Hit
CATAGATGTGCCACATACCTTTCCCATAGATCTCCCTCATTATCCCTGTG2790.1425906523905655No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCACATAGAACAGCTAAAAATCTTG2780.14207957478343086No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT2780.14207957478343086No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT2760.1410574195691616No Hit
CATAGAGAACAGCCCTGAGAGAATGCTACACATAGAGAACAGCTAAAAAT2750.14054634196202692No Hit
CATAGAATACAACACACTCTCTGCCCTGCACTGACGACATGGCTCACACC2550.13032478981933407No Hit
CATAGAGAACAGCCCTGAGAGAATGAGAACAGCTAAAAATCTTGGAGCTC2490.1272583241765262No Hit
CATAGATGGAAATTTTTGGCCAGGTGCAAATTGTCAGTGTGTCTATGAGA2460.12572509135512228No Hit
CATAGACCTGTGTGTGAGGCATTGTTTAGACATGTGTGAGAGGGAAGGAC2450.12521401374798763No Hit
CATAGAAATCTGCAACAATATCATTCTCCTTGGAGAGAAATGCTGCTCTA2320.11857000485523726No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC2270.11601461681956404No Hit
CATAGAATACAACACACTCTCTGCCCTGTGATACCTGTCCTCTGCCTCTT2190.1119259959624869No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGACGGTACTTCTAT2190.1119259959624869No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGACAGCCGCTCACCTCTATG2170.11090384074821762No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTCAGTGTGGACTACAAGTACC2120.1083484527125444No Hit
CATAGAGGCAGGTGGGTAGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG2110.10783737510540975No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG2070.10579306467687119No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG2040.10425983185546725No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC1970.10068228860552475No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGAGACAGCCGCTCACCTCTATG1960.1001712109983901No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)