FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806615

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806615
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22871
Sequences flagged as poor quality0
Sequence length150
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATGTCCATCATGTGGAAGCTGGAGAGTCACTTCTTTTGATAATTC19178.38179353766779No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC14356.2743211927768785No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGCGTT12905.640330549604303No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA10204.4597962485243325No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA8733.817060906825237No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT8263.611560491452057No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC7673.3535918849197675No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA7603.322985440076953No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA7303.191814962179179No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT6772.9600804512264443No Hit
CATAGAGCCAAGGAAAGTTGAATGGATAGGGCAAAAAATGCATAGGATAA6332.7676970836430415No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT5892.575313716059639No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA5432.374185649949718No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG5352.3392068558436447No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG3411.4909710987713698No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATATGTCTTTATCAGCAGCATT3391.4822264002448515No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCCATCTCTA2921.2767259848716717No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT2881.259236587818635No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA2471.0799702680250098No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC2421.058108521708714No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC1900.8307463600192383No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG1860.8132569629662018No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA1530.6689694372786498No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA1320.5771501027502077No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGACTGTA1320.5771501027502077No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATATCCCCAGAAATGTTAGCA1150.5028201652748022No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTGTTATTCAAAGGTTTTCTGC1090.47658606969524725No Hit
CATAGAGAGATTTTGGGCTGAGACGATGCATGGTACTGGTACCAAAACAG1080.47221372043198806No Hit
CATAGATTGGAACTTTGCCAGCCTTATTTAAAACAGAAATTAAAGGTGCC1040.4547243233789515No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT1030.45035197411569233No Hit
CATAGAGCTGGCTTCCTAACTTCCAAAGCTGCTTCCTTCTGCTGGCTATT1010.44160727558917406No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCGTATGCTTCCTTCTGCTGGC980.42849022779939666No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT920.40225613221984174No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG870.38039438590354596No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA830.36290498885050937No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGACACTGACTGATACAGGAAGG760.3322985440076953No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCAAGTCTA740.32355384548117705No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA680.29731974990162213No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATATCCCCAGAAA630.2754580035853264No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGTC610.2667133050588081No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAT610.2667133050588081No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCATGAGACCA600.26234095579554895No Hit
CATAGATATCCATCATGTGGAAGCTGGAGAGTCACTTCTTTTGATAATTC580.2535962572690306No Hit
CATAGATCCTCTCATTGTCCAGTTTGGCCAACATGGTGAAACTCCATCTC530.23173451095273492No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT530.23173451095273492No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG470.20550041537317998No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAA460.20112806610992087No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA440.19238336758340258No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA440.19238336758340258No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTCTCTGCTA430.1880110183201434No Hit
CATAGACCTTTGGGTTCATATCATCTGGATAGAATCCTTTCCCTCACTCT410.17926631979362512No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTATCCCCAGAAATGTTAG400.17489397053036596No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTATAGACGGGGTTT390.17052162126710682No Hit
CATAGAGAGATTTTGGGCTGAGACAATAATGCCGCATATCTACAACTATC380.16614927200384766No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG370.16177692274058852No Hit
CATAGATGCCCTTTTTGTGTGCTTCTTTCAAAAGTCTGGTCTATGAGACC360.15740457347732936No Hit
CATAGATGCCCTTTTTGTGTACTTCCAGATGCCCTTTTTGTGTGCTTCTT340.14865987495081107No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCAA340.14865987495081107No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTCAGTACAAAATTTCTC310.13554282716103364No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCACAATCCCCAGAAATGTTAGC310.13554282716103364No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC300.13117047789777447No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC300.13117047789777447No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCTTCCGTA290.1267981286345153No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT290.1267981286345153No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTTATCCCCAGAAATGTT290.1267981286345153No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA290.1267981286345153No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA280.12242577937125616No Hit
CATAGAGCGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC270.11805343010799701No Hit
CATAGATACCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA260.11368108084473788No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA250.10930873158147873No Hit
CATAGACCAATAAAAGTTGATGGGATGAACAATGGGCAAGCAATGACAGT240.10493638231821958No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)