FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806616

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806616
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22871
Sequences flagged as poor quality0
Sequence length150
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAATAGCCAGCAGAAGGAAGCAACCCAAATGGACATTTCACTTATA19338.451751125879934No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG15706.864588343316864No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA14616.388002273621616No Hit
CATAGATGGAGAGAGTGAGGGAAAGGAAATTATGGGAGCCCTGTGAAACG12715.557255913602378No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTTGTATATCT8753.8258056053517557No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT8453.694635127453981No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCACC8103.5416029032399106No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA7603.322985440076953No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA7413.2399108040750293No Hit
CATAGACCCTTACCAATAACACAATCAACACATATTTTACGTGTTACATA6792.9688251497529623No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT6772.9600804512264443No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT6332.7676970836430415No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA5602.4485155874251237No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG3601.5740457347732935No Hit
CATAGACCTCCTGTTTGACCATTTTGACTGTTATTACAAAATAATGTTAA3271.429758209085742No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTCTACT3181.3904070657164096No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACCCGCCAC2991.3073324297144857No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA2531.1062043636045646No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGAAGTCAAATTGTCC2411.0537361724454548No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG1920.8394910585457567No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCCCTTAAGAAAATTTAATTG1680.7345546762275371No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGTGCACCAC1360.5946394998032443No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGCACCAC1350.5902671505399851No Hit
CATAGACATGCTAACATTTCTGGGGATATTACTGGGGACTGTGACTCTGT1210.529054260854357No Hit
CATAGAGCAGAAAACCTTTGAATAACAGAGCAGGAATTAGACTCTTGACA1120.48970311748502465No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT1080.47221372043198806No Hit
CATAGAATAGCCAGCAGAAGGAAGCATACGGAGCAGGAATTAGACTCTTG1050.45909667264221066No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGCTTTGGAAGTTAGGAAGCCAGCT1050.45909667264221066No Hit
CATAGATTGCATAGCCATGTGTAGCCAGTGGCTACCATACTGGGTAGCAC1020.44597962485243325No Hit
CATAGACCAGACTTTTGAAAGAAGCACATGGAAGTACACAAAAAGGGCAT1000.43723492632591493No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTAATACAAAAAATTAG910.39788378295658255No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA840.36727733811376856No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCACTGGGGACTGTGACTCT790.3454155917974728No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCACCAC750.3279261947444362No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCTGCCAC690.30169209916488127No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT680.29731974990162213No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTCAAA640.27983035284858554No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA630.2754580035853264No Hit
CATAGACATGCTAACATTTCTGGGGATATGCTAACATTACTGGGGACTGT620.27108565432206727No Hit
CATAGAATAGCCAGCAGAAGGAAGCACACAAAAAGGGCATCTATGTGTAG550.24047920947925322No Hit
CATAGACATGCTAACATTTCTGGGGATAACGGTAGCAGAGACTTGGACTC540.23610686021599403No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT540.23610686021599403No Hit
CATAGACTGTCATTGCTTGCCCATTGCAGAGACTTGGTCTCATGACTGTC540.23610686021599403No Hit
CATAGACATGCTAACATTACTGGGGACTGTGACTCTGTTTTCTATGTGTA500.21861746316295746No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA500.21861746316295746No Hit
CATAGAAGCAGGATGAAAACATGGTACATTACTGGGGACTGTGACTCTGT490.21424511389969833No Hit
CATAGACATGCTAACATTTCTGGGGATTCTCATAGACATGCTAACATTAC470.20550041537317998No Hit
CATAGACATGCTAACATTTCTGGGGATAACTTGGTCTCATAGACATGCTA440.19238336758340258No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATCCAGATGATATGAACCC420.18363866905688428No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTAAAGGCACCTACTGG400.17489397053036596No Hit
CATAGACATGCTAACATTTCTGGGGATACATTACTGGGGACTGTGACTCT390.17052162126710682No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTTGTA370.16177692274058852No Hit
CATAGACATGCTAACATTTCTGGGGATTGTGACTGGGGACTGTGACTCTG370.16177692274058852No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTGGAAGTAC360.15740457347732936No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG350.15303222421407023No Hit
CATAGACTGCCTCAGCCTCCTGAGTATCTGGGATTACAGGCGCCCCACCA340.14865987495081107No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGCGATTACAGGCGCCTGCCAC330.14428752568755193No Hit
CATAGACATGCTAACATTTCTGGGGATAAACATTACTGGGGACTGTGACT320.13991517642429277No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGACTAGGCAATTTACAAATCT310.13554282716103364No Hit
CATAGATGGAGAGAGTGAGGGAAAGGAAGTTATGGGAGCCCTGTGAAACG300.13117047789777447No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTATAGGTACTAATTTT290.1267981286345153No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT290.1267981286345153No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGCCACCCGCCAC260.11368108084473788No Hit
CATAGATGAAAAGTCAAGCCAGCACAGCGAAACCCCATCTCTACTAAAAA250.10930873158147873No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA250.10930873158147873No Hit
CATAGACTGTCATTGCTTGCCCATTGTTCATCCCATCAACTTTTATTGGT250.10930873158147873No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAGATCA250.10930873158147873No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA230.10056403305496044No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGGTCTCATAGACTGTCATTGC230.10056403305496044No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)