FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806619

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806619
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences166520
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC104186.2563055488830175No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA83675.024621667067019No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA80884.85707422531828No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC66103.9694931539754985No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA52393.146168628392986No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG51033.0644967571462884No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA47802.8705260629353835No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA47402.8465049243334133No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT40862.453759308191208No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA38432.307830891184242No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA30281.818400192169109No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA29791.7889742973816958No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT23921.4364640883977902No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG22861.3728080711025703No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC16370.9830650972856113No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT15470.9290175354311795No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA14580.8755705020417969No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT14140.8491472495796302No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC13270.796901273120346No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA12630.7584674513571943No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC12360.7422531828008647No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT12050.7236368003843382No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC11850.7116262310833533No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA11810.7092241172231564No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC11420.6858035070862358No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT11410.6852029786211866No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT11390.6840019216910882No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT11090.6659860677396109No Hit
CATAGATGCGCCAGGGTAAAGTCATAAACCAAGTAGGAAAATGTCAGTGG10770.646769156858035No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGACAAGCACATTATTATTG9770.5867163103531107No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATACCTGGCAAAAGGGTAAGAGT9580.5753062695171751No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA9290.5578909440307471No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA8700.5224597645928417No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGGTGGTGCTGGAACTAGTTCTA8630.518256065337497No Hit
CATAGAGCATCCTCGTAATAGCAAACATTACACTGACGACAATGGGCACA8590.5158539514773001No Hit
CATAGATGCACCAGAAGCCACCTACCGTAAGTCACTCAAATATAGACCTC8420.5056449675714628No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACCAGCATGAGAAGAATG8290.49783809752582275No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG8280.49723756906077343No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT8210.49303386980542874No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG7970.4786211866442469No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG7850.471414845063656No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG7770.46661061734326204No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCAAGGTGTACAGCCTACATCC7440.4467931779966371No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGCCCTGTGATTGTCCTGGTCTAT7440.4467931779966371No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG7290.43778525102089844No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA7110.426975738650012No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT7010.4209704539995196No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC6720.40355512851309155No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA6540.3927456161422051No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA6400.3843382176315157No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG6240.37472976219072784No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT6220.3735287052606293No Hit
CATAGATCATGAATGACTCCCACTCTGAGGTTCTTCAACACAGCTATTCT5970.3585154936343983No Hit
CATAGACCCACTTACACACACAGGTTTGGGGGAAGAGAAACAGAATCTAT5960.357914965169349No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT5490.32969012731203456No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA5480.32908959884698535No Hit
CATAGATTGCCTCATTGTGCCAGACAAGCACATTATTATTGGTTGGTTCT5410.32488589959164066No Hit
CATAGAAGGGCAATTATCTCATCCTAGACACACCCCTTTACCTACCTTCT5320.31948114340619743No Hit
CATAGATGCCATAGACTTTAGGACAATAAGACACTGACGACAATGGGCAC5090.30566898871006487No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA4990.29966370405957243No Hit
CATAGACCATGTAATACCATCGTGAGCAGCTACACATAGATGTCCCCCTT4930.29606053326927695No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA4880.29305789094403073No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGAACAAGGGCATGGTCAA4840.2906557770838338No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT4830.29005524861878457No Hit
CATAGATGCACCAGAAGCCACCTACCGTATGAGGTTCTTCAACACAGCTA4780.2870526062935383No Hit
CATAGAATCCCTGCCCTTGACCTTGGCTCTCTTCCGCCTTTATCCTTCTA4590.2756425654576027No Hit
CATAGACCCCCATGCAACCACATCTATGCCTGGCAAAAGGGTAAGAGTTC4520.271438866202258No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTACACTGATCTAGCTTCGGAA4400.2642325246216671No Hit
CATAGATGCACCAGAAGCCACCTACCAGCATGAGAAGAATGGCCTCTATG4390.2636319961566178No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG4370.26243093922651933No Hit
CATAGATCATGAATGACTCCCACTCTGGTGAAAAGTAGGGGACAGTTCTA4270.2564256545760269No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACCCGTAATCCCTCCCTTTTCTA4260.2558251261109777No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA4120.24741772760028827No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA4090.24561614220514053No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCAAGTATATGACACATTACA4020.2414124429497958No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT3960.23780927215950035No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGCCCCTTCATTTTGCTG3940.23660821522940187No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA3920.23540715829930337No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGACCTTTTAGCTATTAAGAT3910.23480662983425415No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT3830.2300024021138602No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAACACTGACGACAAGGTTTTC3690.2215950036031708No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC3610.21679077588277687No Hit
CATAGAAGGGCAATTATCTCATCCTAGACACACTGACGACAATGGGCACA3600.21619024741772758No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTTGCAAACAGAATGGGACC3570.2143886620225799No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCTTTTAGCTATTAAGATGTTG3520.21138601969733364No Hit
CATAGAATTGCCTACTTTGGGACCCAAGTATATGACACATTACACCAGTC3520.21138601969733364No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTTGTCCTTGCACA3520.21138601969733364No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTTTTGCCAAGATTGTAGGAGTA3460.2077828489070382No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA3460.2077828489070382No Hit
CATAGATGTGTGAGAGAGGGAGAGACATGCCATCTATGTGTAGCCAGCAT3440.2065817919769397No Hit
CATAGATCATGGGACTTCAGCATGGCTCTCTTCCGCCTTTATCCTTCTAT3400.20417967811674273No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTGGCAAAAGGGTAAGAGTTCTAT3390.20357914965169352No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA3370.20237809272159502No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA3330.19997597886139803No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC3290.19757386500120105No Hit
CATAGAATCCCTGCCCTTGACCTTGGACACTGACGACATGGTTCTACACC3260.19577227960605334No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCAGCATGAGAAGAATGGCCTCT3180.19096805188565938No Hit
CATAGAATCCCTGCCCTTGACCTTGGGTTCTATACATCGGCCGCACTGAA3160.18976699495556087No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA3120.18736488109536392No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATTGTCCTTGCACACCATGG3070.1843622387701177No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA3050.18316118184001923No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTTCCCTCTCCCCAAAATT2970.17835695411962527No Hit
CATAGAACCCTGCTTCCTAAATCAACAAGGGCATGGTCAAGTGTCTATGA2920.17535431179437905No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT2870.17235166946913283No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA2790.1675474417487389No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2750.16514532788854192No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC2700.1621426855632957No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTTGGGGGAAGAGAAACAGAAT2670.16034110016814798No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT2540.1525342301225078No Hit
CATAGAATCCCTGCCCTTGACCTTGGGTCCATTTTTGGTTCTCTTCTATG2510.1507326447273601No Hit
CCCGTAATCCCTCCCTTTTCTATGAGACCAAGTCTCTGCTACCGTAGACG2440.14652894547201537No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC2430.14592841700696613No Hit
CATAGATGGCATGTCACTTCCTCAGACGGTGTACAGCCTACATCCCTCAT2420.1453278885419169No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAAGCACATTATTATTGGTTGG2380.1429257746817199No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCCTTAGGAGTT2350.1411241892865722No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT2340.14052366082152293No Hit
CATAGAATCCCTGCCCTTGACCTTGGACACTGACGACATGGGTCCATTTT2340.14052366082152293No Hit
CATAGATGCACCAGAAGCCACCTACCTTCTCAGCCCCCTTTACCTACCTT2320.13932260389142445No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT2210.13271679077588278No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGGAACAAGGGCATGGTCAAG2150.12911361998558732No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT2120.12731203459043958No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGGGCAAGTGTATGGTCAGT2110.12671150612539034No Hit
CATAGAATTGCCTACTTTGGGACCCAGTCCCCGCTCTCTTCCGCCTTTAT1990.11950516454479942No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGCCAGCATGAG1900.11410040835935624No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTCTGCTTAGG1790.10749459524381456No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG1750.1050924813836176No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAACAAGGGCATGGTCAAG1750.1050924813836176No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)