FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806620

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806620
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences166520
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG105296.322964208503483No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT83915.0390343502282No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT81004.864280566898871No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG64353.8644006725918807No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG51523.0939226519337018No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT51233.0765073264472735No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT48142.8909440307470575No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT46412.787052606293538No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT40552.4351429257746817No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT37982.280807110257026No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT29741.7859716550564497No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT29621.7787653134758588No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT25481.530146528945472No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG22721.3644006725918807No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG16020.9620466010088878No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT15520.9320201777564256No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC14660.8803747297621907No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG13870.8329329810233006No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC13670.8209224117223156No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT12400.7446552966610618No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC12400.7446552966610618No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT11960.7182320441988951No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT11560.6942109055969253No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT11360.6822003362959403No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC11360.6822003362959403No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT11290.6779966370405957No Hit
CATAGATGGCCCACTGACATTTTCCTACTTGGTTTATGACTTTACCCTGG10900.6545760269036752No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT10900.6545760269036752No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTCATAGAACTTTCCCACCG9820.589718952678357No Hit
CATAGAACTCTTACCCTTTTGCCAGGTATAGAACTTTCCCACCGCCCTTT9600.5765073264472736No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT9440.5668988710064857No Hit
CATAGAACTAGTTCCAGCACCACCAGACACTTGAAAGCTCCCTGGATCTA8760.5260629353831372No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT8540.5128513091520538No Hit
CATAGAGGCCATTCTTCTCATGCTGGTACGGTAGCAGCTCCTCTTCTCTT8360.5020417967811674No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTAATGTTTGCTATTA8180.49123228441028105No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT8180.49123228441028105No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTTACGGTAGGTGGCTTCTGG8140.48883017055008404No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG7970.4786211866442469No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA7940.4768196012490992No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG7890.473816958923853No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA7710.46300744655296655No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG7680.46120586115781886No Hit
CATAGATGAGGGATGTAGGCTGTACACCTTGGTCTAGGATGAGATAATTG7360.44198895027624313No Hit
CATAGACCAGGACAATCACAGGGCACCAAGGTCAAGGGCAGGGATTCTAT7280.4371847225558491No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC7240.43478260869565216No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT7180.43117943790535673No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG7090.42577468171991356No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT6810.4089598846985347No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC6650.39935142925774686No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT6420.38553927456161424No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC6370.382536632236368No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT6290.37773240451597406No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGAGTGGGAGTCATTCATGATCT5930.35611337977420127No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACCTGTGTGTGTAAGTGGGTCTAT5810.34890703819361035No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTGGCACAATGAGGCAATCT5520.3314917127071823No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT5470.32848907038193614No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA5460.3278885419168869No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTGTGTCTAGGATGAGATAATTG5190.3116742733605573No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTCTTATTGTCCTAAA4910.2948594763391785No Hit
CATAGAGTTCCAGCAAAATGAAGGGGGACATCTATGTGTAGCTGCTCACG4860.29185683401393225No Hit
CATAGAATAGCTGTGTTGAAGAACCTCATACGGTAGGTGGCTTCTGGTGC4810.28885419168868604No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA4790.28765313475858756No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG4770.2864520778284891No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT4700.2822483785731444No Hit
CATAGACACTTGACCATGCCCTTGTTCACTGACGCCATGCTGAAGTCCCA4690.2816478501080951No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCAAGGTCAAGGGCAGGGATTCTA4570.2744415085275042No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTAAGAAAGAAAACCCAC4460.2678356954119625No Hit
CATAGAACTCTTACCCTTTTGCCAGGCATAGATGTGGTTGCATGGGGGTC4410.2648330530867163No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC4290.2576267115061254No Hit
CATAGAGGCCATTCTTCTCATGCTGGTAGGTGGCTTCTGGTGCATCTATG4290.2576267115061254No Hit
CATAGAACTGTCCCCTACTTTTCACCAGAGTGGGAGTCATTCATGATCTA4280.2570261830410761No Hit
CATAGAAAAGGGAGGGATTACGGGTGGATCTCAGAGTTAGCTTGCCTCTA4250.2552245976459284No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA4150.24921931299543598No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG3980.23901032908959885No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA3950.2372087436944511No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCCATAGAACTTTCCCACCG3940.23660821522940187No Hit
CATAGAGTTCCAGCAAAATGAAGGGGCTCATAGATGGGTCCCAAAGTAGG3890.23360557290415562No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGCAGTTAGGCTACTTGGG3850.23120345904395867No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC3830.2300024021138602No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT3700.22219553206822001No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTTGCCAAGTAAGTC3610.21679077588277687No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTGTCTAGGATGAGAT3520.21138601969733364No Hit
CATAGATCCATGGTGTGCAAGGACAAGATCCATGGTGTGCACAGGACATT3510.2107854912322844No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCTAGGATGAGATAATTGCC3480.2089839058371367No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTCCCAAAGTAGGCAATTC3470.20838337737208745No Hit
CATAGATGGGTCCCATTCTGTTTGCAACACTGCTCACGATGGTATTACAT3470.20838337737208745No Hit
CATAGATCTACTCCTACAATCTTGGCAAAAGCATTCTTTCTCCAGACCTT3450.20718232044198895No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCATGCTGAAGTCCCATGATCTAT3390.20357914965169352No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT3390.20357914965169352No Hit
CATAGAACTCTTACCCTTTTGCCAGGCTATCTTCTGCTGCACTGCTCTAT3370.20237809272159502No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT3360.20177756425654578No Hit
CATAGAGGCCATTCTTCTCATGCTGGCTACACATAGATGGCATGTCTCTC3360.20177756425654578No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3260.19577227960605334No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC3250.19517175114100407No Hit
CATAGAAAAGGGAGGGATTACGGGTGTAGAACCATGTCGTCAGTGTCCAA3240.19457122267595484No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT3180.19096805188565938No Hit
CATAGAGGCCATTCTTCTCATGCTGGCATTCTTTCTCCAGACCTTCATCT3160.18976699495556087No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT3080.18496276723516694No Hit
CATAGACAATTTCAGTGCGGCCGATGTATAGAACCCAAGGTCAAGGGCAG3060.18376171030506847No Hit
CATAGATCCATGGTGTGCAAGGACAATGGTGTGCACAGGACATTGGGGAA3030.18196012490992072No Hit
CATAGAGCAGAATTTTGGGGAGAGGGAACACTGAACGAAATTTAGGTGAG2960.17775642565457603No Hit
CATAGACACTTGACCATGCCCTTGTTGATTTAGGAAGCAGGGTTCTATGT2790.1675474417487389No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA2790.1675474417487389No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC2690.16154215709824646No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGAAAGAAAACCCACAAAAGACGT2630.157938986307951No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2590.15553687244775402No Hit
CATAGAAGAGAACCAAAAATGGACCCAAGGTCAAGGGCAGGGATTCTATG2550.15313475858755704No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT2520.15133317319240933No Hit
CATAGAAAAGGGAGGGATTACGGGTGTAGAACCATGTCGTCAGTGTAGAT2510.1507326447273601No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC2460.14773000240211387No Hit
CATAGATGAGGGATGTAGGCTGTACACCGTCTGAGGAAGTGACATGCCAT2400.1441268316118184No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGGATCTCAGAGTTAGCTTGC2400.1441268316118184No Hit
CATAGACAGGGGCCAGAACTCCTAAGGACTTGGTCTCATAGACAGGGGTG2370.14232524621667067No Hit
CATAGACACTTGAAAGCTCCCTGGATCTATGTGTAGAACCATGTCGTCAG2340.14052366082152293No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT2330.1399231323564737No Hit
CATAGAAGAGAACCAAAAATGGACCCATGTCGTCAGTGTCCAAGGTCAAG2260.135719433101129No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT2260.135719433101129No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGGCTGAGAAGGTAGGTGGCTTCT2230.13391784770598125No Hit
CATAGAACTGACCATACACTTGCCCTCATAGAACTTTCCCACCGCCCTTT2200.13211626231083354No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT2110.12671150612539034No Hit
CATAGACACTTGACCATGCCCTTGTTCCATAGACACTTGAAAGCTCCCTG2100.1261109776603411No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGGGGACTGGGTCCCAAAGTAGGC1980.11890463607975017No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC1930.11590199375450397No Hit
CATAGACAGGGGCCAGAACTCCTAAGCAGAGACTTGGTCTCATAGACAGG1810.10869565217391304No Hit
CATAGAGGCCATTCTTCTCATGCTGGCTTGGTCTCATAGATGGGTCCCAA1790.10749459524381456No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGATGGGTCCCAAAGTAGGCA1730.1038914244535191No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA1720.10329089598846986No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)