FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806622

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806622
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51468
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA43008.354705836636358No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT39577.6882723245511775No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA34876.775083547058366No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA29705.770575891816274No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA27535.348954690292997No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT21254.128779047174944No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT16833.269993005362555No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT16003.1087277531670163No Hit
CATAGAAAGAGACAGAAGAGAAGGTCATTTAAGGCCATGCTGAAGTCCCA13442.611331312660294No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG13422.607445402968835No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCCCTTAAGAAAATTTAATTG10932.123649646382218No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTATGCAAGACTAGGCAATTTACA9741.8924380197404211No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG9421.8302634646770808No Hit
CATAGAGTTCAAATGGCCAATCAGGTACACTGGGGACTGTGACTCTGTTT9161.7797466386881167No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA8381.6281961607212248No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACCATGTCGTCAGTGT7801.5155047796689205No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT7051.3697831662392166No Hit
CATAGAATAGCCAGCAGAAGGAAGCAACACTGACGCCATGCTGAAGTCCC6641.2901220175643118No Hit
CATAGATGGAGAGAGTGAGGGAAAGGCCAGATGATATGAACCCAAAGGTC6231.210460868889407No Hit
CATAGACCAGACTTTTGAAAGAAGCACATGGAAGTACACAAAAAGGGCAT6161.1968601849693012No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATGCCATGCTGAAGTCCCA5781.1230279008315847No Hit
CATAGAGGTGAGCGGCTGTCTCCATCACTTATACGCCTCCCTGTCTATGT5701.1074842620657495No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTTCAACCCCTTAAGAAAATTTAATT4720.9170746871842699No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG4520.8782155902696822No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG4460.8665578611953058No Hit
CATAGAGGTGAGCGGCTGTCTCCATCTATGAGACCAACTCAGATGGGATC3680.7150073832284137No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA3550.6897489702339318No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTGTTTCTCTCTATCTGATTT3510.6819771508510143No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCGGTTGTCTGGGTGGTTT3380.6567187378565322No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT3120.6062019118675682No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCATCACTTATACGCCTCCC2940.5712287246444393No Hit
CATAGACATGCTAACATTTCTGGGGATACTGGGGACTGTGACTCTGTTTT2920.5673428149529804No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT2810.5459703116499572No Hit
CATAGACATGCTAACATTTCTGGGGATATGCTAACATTACTGGGGACTGT2760.5362555374213103No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATCAACCCCTTAAGAAAATTTAAT2550.49545348566099323No Hit
CATAGAGGTGAGCGGCTGTCTCCAACACTGACGCCATGCTGAAGTCCCAT2530.49156757596953443No Hit
CATAGAGGTGAGCGGCTGTCTCCATCTATGAGACCAAGAGCCATGCTGAA2480.4818528017408875No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG2320.4507655242092174No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGGAAGT2070.4021916530659827No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTATAGAACCATGTCGTCATCAC1780.3458459625398306No Hit
CATAGACATGCTAACATTACTGGGGACTGTGACTCTGTTTTCTATGTGTA1740.33807414315691303No Hit
CATAGACATGCTAACATTTCTGGGGATATTACTGGGGACTGTGACTCTGT1700.3303023237739955No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGACTAGGCAATTTACAAATCT1480.287557317167949No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTAGAT1450.2817284526307609No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA1430.2778425429393021No Hit
CATAGAAGCAGGATGAAAACATGGTACATTACTGGGGACTGTGACTCTGT1150.2234398072588793No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA1130.21955389756742055No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA1060.20595321364731486No Hit
CATAGAGCAGAAAACCTTTGAATAACAGCTTCCACATGATGGACATCTAT1030.20012434911012666No Hit
CATAGAATCCTTTCCCCATTGCTTGTCCATGCTGAAGTCCCATGATCTAT970.18846662003575038No Hit
CATAGATTGCATAGCCATGTGTAGCCAAACTGGACAATGAGAGGATCTAT960.18652366519002098No Hit
CATAGAATCCTTTCCCCATTGCTTGTCCATTCTTGCTCATTATTATTGGA790.15349343281262143No Hit
CATAGAATCCTTTCCCCATTGCTTGGCCATGCTGAAGTCCCATGATCTAT780.15155047796689206No Hit
CATAGAATAGCCAGCAGAAGGAAGCACACAAAAAGGGCATCTATGTGTAG750.14572161342970388No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA710.13794979404678634No Hit
CATAGAATCCTTTCCCCATTGCTTGTCTGTGACAGCTTCCACATGATGGA640.12434911012668065No Hit
CATAGATTGCATAGCCATGCTGAAGTCCCATGATCTATGTGTAGAACCAT630.12240615528095126No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGTACCCTAAAGCCCTTGTGA620.12046320043522188No Hit
CATAGAGGTGAGCGGCTGTCTCCATGATCTATGTGAACCATGTCGTCAGT620.12046320043522188No Hit
CATAGATGACTTGGGGGAAAATGGTACACTGACGCCATGCTGAAGTCCCA600.11657729074376312No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTACTG600.11657729074376312No Hit
CATAGAATCCTTTCCCCATTGCTTGCCATGCTGAAGTCCCATGATCTATG590.11463433589803373No Hit
CATAGACTGTCATTGCTTGCCCATTGTTTGGAAGTTAGGAAGCCAGCTCT590.11463433589803373No Hit
CATAGACTGTCATTGCTTGCCCATTGTTGGAAGTTAGGAAGCCAGCTCTA580.11269138105230435No Hit
CATAGATATGCCCATGGTTAGGAAGCCATGCTGAAGTCCCATGATCTATG550.10686251651511619No Hit
CATAGACATGCTAACATTTCTGGGGATAGTCTCATAGACATGCTAACATT540.1049195616693868No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTAGAACCATGTCGTCAGTGT540.1049195616693868No Hit
CATAGACTTCCTTGCCCCCATTTATTATAGAGCAGGAATTAGACTCTTGA530.10297660682365743No Hit
CATAGAGGTGAGCGGCTGTCGCCATGCTGAAGTCCCATGATCTATGTGTA520.10103365197792803No Hit
CATAGACTGTCATTGCTTGCCCATTGGTCTCATAGACTGTCATTGCTTGC520.10103365197792803No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)