FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806625

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806625
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44102
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1985645.022901455716294No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA15283.4646954786630992No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC8591.9477574713164933No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT8421.9092104666455036No Hit
CATAGAGAAGAGAAGGCGACAATGGCTCTATGAGACCAAGTCTCTGCTAC6151.3944945807446374No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC5091.1541426692666998No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC4991.1314679606367057No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT4891.1087932520067119No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACACA3860.8752437531177725No Hit
CATAGACTTGATGCCCAGGAAACCTCATGGTGTTACTTAAAGACTTGAGA3640.8253593941317854No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA3630.823091923268786No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG3490.7913473311867942No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG3370.7641376808308014No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA3270.7414629722008073No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT3140.7119858509818149No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT2960.6711713754478256No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG2880.6530316085438301No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTCAGACATGTTTCCTA2700.6122171330098408No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT2590.5872749535168473No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA2480.5623327740238538No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA2440.5532628905718562No Hit
CATAGAACAATGTAATAAGCATCGGAGGACACTGACGACATGGTTCTACA2110.47843635209287555No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC1890.4285519931068886No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT1860.42174958051789035No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGACGACATGGGCAAC1830.41494716792889214No Hit
CATAGACCCTTAGAGTTTCAGCCTCCGTACTTCAGTTGACTATAAGAAAC1830.41494716792889214No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT1630.3695977506689039No Hit
CATAGAGAAGAGAAGGCGACAATGGCTGCTTTTCTCTTCTTGGCATCTAT1490.3378531585869122No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTACACTGACGACATGGTGGGTG1470.33331821686091334No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT1390.31517844995691807No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG1360.30837603736791985No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC1230.2788989161489275No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC1210.27436397442292865No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTCAGACATGTTTCCTAGTTT1150.2607591492449322No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1130.2562242075189334No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT1110.25168926579293455No Hit
CATAGAGCAAAAGAGAAACATTAAGCCATAGTACGGTAGCAGACTCTTCA1110.25168926579293455No Hit
CATAGACAGGAGGAGGAAGAAGAGGAATTCTTGCCAGGGATCTATGAGAC1100.24942179492993513No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC1090.24715432406693574No Hit
CATAGACCCTTAGAGTTTCAGCCTCCCACTGACGACATGGTTCTACACAT1070.2426193823409369No Hit
CATAGACAGGAGGAGGAAGAAGAGGAGAGGCTGTTAGCTTGGGTGACAGA1060.2403519114779375No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1040.23581696975193867No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC1020.23128202802593986No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1000.22674708629994103No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG950.215409731984944No Hit
CATAGACCCTTAGAGTTTCAGCCTCCAGTGCAGTGGTCAAGTGACCATAC910.20633984853294635No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG900.20407237766994693No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG830.18820008162895105No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG820.18593261076595166No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC800.18139766903995283No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCAAGATTTATTGCAAAGAGCTAAA770.1745952564509546No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTGTTACAACC720.16325790213595753No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG720.16325790213595753No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG700.15872296040995873No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT690.15645548954695931No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG650.14738560609496168No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG650.14738560609496168No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG620.14058319350596346No Hit
CATAGACAGGAGGAGGAAGAAGAGGAAAATTCTAGTAACTCTTAATTCCT590.13378078091696521No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCTGACGACATGGTTCTACACATAG580.1315133100539658No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACACTGACGACATGGTTCTACACA560.126978368327967No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGATCTGAGCAAGGATAGCCCT550.12471089746496757No Hit
CATAGAACCCAAAGAGTGGGCAACAGAACAACAACATCTATGAGACCAAG520.11790848487596933No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTACACTGGAGACAGCCGCTCA510.11564101401296993No Hit
CATAGAGGGTGTTTTTCGGTGTCACACTGACGACATGGTTCTACACATAG500.11337354314997052No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGC490.11110607228697113No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT480.1088386014239717No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA470.10657113056097228No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC470.10657113056097228No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG470.10657113056097228No Hit
TAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGAG460.1043036596979729No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTGACGACATGGTTCTAC460.1043036596979729No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGATCTGCG450.10203618883497347No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)