FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806627

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806627
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences142263
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT116298.174296900810472No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA109247.678735862451938No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG89106.263048016701461No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA72165.072295677723653No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA61404.315950036200558No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG56333.959567842657613No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA54983.8646731757378943No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT42602.9944539339111365No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG26111.8353331505732342No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA24891.7495764886161547No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA22011.547134532520754No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA21701.5253439053021516No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT19191.3489101171773406No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG18301.2863499293561924No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAACATTAGCTTAGTTAATTAGGGA16121.1331126153673128No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC15871.115539528900698No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA14501.0192390150636497No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT11530.8104707478402676No Hit
CATAGACCCCATGTGCAGTGTAAGCTATAGACCAAAGCTAGAAACTCCCA11310.7950064317496468No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG9870.6937854537019463No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT9550.6712919030246797No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA8850.6220872609181586No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT8670.609434638662196No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA8410.5911586287369168No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAACATTAGCTTAGTTAATTA8390.5897527818195877No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT8380.589049858360923No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA8250.5799118533982834No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA7650.5377364458784083No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACAGCTAAAAATCTTGGAGCTC6770.47587918151592473No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT6660.46814702347061427No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG6500.45690024813198094No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG6480.45549440121465173No Hit
CATAGATGCTTCTGATATGTTGCCGTAGAACATTAGCTTAGTTAATTAGG6360.4470593197106767No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA6070.42667453940940375No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC5450.38309328497219935No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATAGAACAGCTAAAAATCTT5290.371846509633566No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT5250.3690348157989077No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT5230.3676289688815785No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC5080.3570851170016097No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG4990.35075880587362845No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA4870.34232372436965336No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC4560.3205330971510512No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACATTAGCTTAGTTAATTAGGG4440.3120980156470762No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACATGTGTGAGAGGG4320.30366293414310114No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACAGTGAAACAAGATC4310.30296001068443656No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC4190.2945249291804615No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGAGAGGAGGGGGCAGAATA4170.2931190822631323No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA4120.2896044649698094No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGAGTCTCGAGGCAGAGGACAGGT3980.2797635365485053No Hit
CATAGATGTGCCACATACCTTTCCCAGGTGCAAATTGTCAGTGTGTCTAT3980.2797635365485053No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTGGGGAAAGAGAGCACTCTA3880.2727343019618594No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC3780.2657050673752135No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG3760.26429922045788434No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT3620.25445829203658016No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT3530.2481319809085989No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT3520.24742905744993426No Hit
CATAGACAGCTGGGGTGGGAGGTTAGCTTGGTCATTCTTCTCTGGGGGCT3200.22493550677266752No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTCCAGTGAACTCAAGGGGGTCT3110.21860919564468625No Hit
CATAGACCTGTGTGTGAGGCATTGTTCCTTGGAGAGAAATGCTGCTCTAT2990.2101741141407112No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG2920.20525364993005912No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTAACTTCATAGCACATCATG2910.20455072647139455No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2830.19892733880207786No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTAATGGAGGAGTATGGGATCT2740.1926010276740966No Hit
CATAGATGTGGTCTCAGTGCCCTATGATTAACTTAGCAACCTGTACATTT2730.191898104215432No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2700.18978933383943822No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTAATGGAGGAGTATGGG2570.1806513288767986No Hit
CATAGATGCTTCTGATATGTTGCCGTACTCCCTCATTATCCCTGTGCCTC2540.17854255850080486No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGGTGGAGGGCTTTGCTGTT2500.1757308646661465No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC2480.1743250177488173No Hit
CATAGAAGTGACCCTCAGCTCAGTGACATGTGTGAGAGGGAAGGACTCTA2320.16307824241018395No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG2310.16237531895151935No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACAGTGAAACAAGATCGTGCCT2280.1602665485755256No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTGGTGGAGGGCTTTGCTGTT2270.15956362511686104No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGGGTAATGGAGGAGTATGG2230.1567519312822027No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT2220.1560490078235381No Hit
CATAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCTAC2220.1560490078235381No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTCTACACATAGAACAGC2130.14972269669555682No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2120.14901977323689225No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA2120.14901977323689225No Hit
CATAGATGCTTCTGATATGTTGCCGTAACTTAGCAACCTGTACATTTCGT2110.14831684977822765No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGCAGGGTAATGGAGGAGTATGGG2070.1455051559435693No Hit
CATAGAATACAACACACTCTCTGCCCTGAGTCTGCTGAGATTGGCCTGTG2060.1448022324849047No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAGCAAACTAACACAGAAA2020.14199053865024636No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG2000.1405846917329172No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT2000.1405846917329172No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1990.13988176827425264No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCGAGGCAGAGGACAGGTATCT1970.13847592135692344No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCAGTTGTGTGTGTGGTCT1940.1363671509809297No Hit
CATAGACCTGTGTGTGAGGCATTGTTGTCAGTGTAGGGTGGGGAAAGAGA1900.13355545714627134No Hit
CATAGATGCTTCTGATATGTTGCCGTAGAACAGCTAAAAATCTTGGAGCT1880.13214961022894217No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACATGTGTGAGAGGGA1880.13214961022894217No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1880.13214961022894217No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACGGACTACAAGTACCCACCAC1870.13144668677027757No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1860.130743763311613No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACAGTGAAACAAGATCGTGCC1850.13004083985294843No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACGGAGATAGAGAGGTTGG1820.12793206947695465No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT1810.12722914601829008No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA1780.1251203756422963No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1750.12301160526630255No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC1740.12230868180763796No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA1740.12230868180763796No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTACACATAGAACAGCTAAAAA1740.12230868180763796No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGACACTGACGACATGTGTGAGAGGG1710.1201999114316442No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGTTGGTGGAGGGCTTTGC1710.1201999114316442No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATATGTTGCCTTTCCTC1690.11879406451431504No Hit
CATAGACTCTGTTTTGCTACCTGGGGATAGAACAGCTAAAAATCTTGGAG1680.11809114105565045No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTAATGGAGGAGTATGGGATC1670.11738821759698587No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC1660.11668529413832128No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACGGACTACAAGTACCCAC1620.11387360030366293No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA1600.11246775338633376No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAAGCTAGAA1590.11176482992766917No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATGGACTACAAGTACCC1590.11176482992766917No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT1570.11035898301034No Hit
CATAGATGTGCCACATACCTTTCCCATACACTGACGACATGTGTGAGAGG1530.10754728917568167No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTACGACATGTGTGAGAGGGA1520.10684436571701708No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGACACTTTGGACTCTGCC1520.10684436571701708No Hit
CATAGATGTGCCACATACCTTTCCCACACGGACTACAAGTACCCACCACC1520.10684436571701708No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAGGAGGGGGCAGAATATC1510.1061414422583525No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTGCAAACTAACACAGAAACAGA1500.10543851879968791No Hit
CATAGATGTGCCACATACCTTTCCCATCTATGAGACCAAAGCTAGAAACT1490.10473559534102332No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC1490.10473559534102332No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGGGTGGGGAAAGAGAGCACTCTA1440.10122097804770037No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT1430.10051805458903579No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)