FastQCFastQC Report
Wed 8 May 2024
EGAF00005806639

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806639
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences170780
Total Bases25.6 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA80384.706640121794121No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG64503.7767888511535306No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA55783.2661904204239374No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA50592.962290666354374No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC48502.839910996603818No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG47322.7708162548307764No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA38232.238552523714721No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT38142.2332825857828786No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA34121.9978920248272631No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT33691.9727134324862399No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT32601.9088886286450404No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA28581.6734980676894249No Hit
CATAGATCATGGGACTTCAGCATGGCTCACACCTATAATCCCATCTATGA25211.4761681695748918No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG24061.408830073779131No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG23981.4041456845063824No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG22341.3081157044150369No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT21471.2571729710738964No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA20851.220868954210095No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG19551.1447476285279308No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG16900.9895772338681343No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC16900.9895772338681343No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC16320.9556154116407074No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC16180.9474177304133974No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT15360.8994027403677246No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT14180.8303079985946833No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA11550.6763087012530742No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT10020.5867197564117579No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT9720.5691532966389506No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC9410.55100128820705No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACGGACTACAAGTACCCACCAC9280.5433891556388336No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT9070.5310926337978686No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG9050.5299215364796814No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGGCTCACA8960.5246515985478394No Hit
CATAGATGCTTCTGATATGTTGCCGTACCTCTAACTTCATAGCACATCAT8820.5164539173205294No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATAGAACAGCTAAAAATCT8310.48659093570675727No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC8310.48659093570675727No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT7760.4543857594566108No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG7390.4327204590701487No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT7160.41925283991099654No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGGCTCAC6870.4022719287972831No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTACACATAGAACAGCTA6860.40168638013818947No Hit
CGGACTACAAGTACCCACCACCTCTATGAGACCAAGTCTCTGCTACCGTA6720.3934886989108795No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT6720.3934886989108795No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA6530.3823632743881017No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG6470.37884998243354023No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACACTTTGGACTCTGCCT6340.3712378498653238No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA6330.3706523012062302No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCAGA6320.37006675254713667No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGCCTCTTGTAGAAGGGATG6290.36831010656985597No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG6200.3630401686380138No Hit
CATAGAACATCTACAGAACTCTCTACCCACCAGAACATTAGCTTAGTTAA6010.351914744115236No Hit
CATAGACTCTGTTTTGCTACCTGGGGACTACAAGTACCCACCACCTCTAT5710.33434828434242886No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG5540.32439395713783814No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGACCAAAGCTAGAAACTCCCATCT5450.31912401920599603No Hit
CATAGATGATCCATCTACCTCTGCTTCACACTGACGACATGGCTCACACC5440.3185384705469025No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAAGGACACTTTGGACTCTGCCTC5300.31034078931959247No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTGTTCACTCTGATGGTACTTCTA5180.3033142054104696No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGACGACATGGCT5170.30272865675137606No Hit
CATAGAATACAACACACTCTCTGCCCTGCACTGACGACATGGCTCACACC5070.29687317016044035No Hit
CATAGAGCCTCCACTCTTCTCGCTATCACACTGACGACATGGTTCTACAC5070.29687317016044035No Hit
CATAGATGGAAATTTTTGGCCAGGTGCAAATTGTCAGTGTGTCTATGAGA4780.27989225904672677No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGTGTGAGAGGGAAGGACTCTAT4770.2793067103876332No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTATAGACCAAAGCTAGAAACTC4660.27286567513760396No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACCGGCTGAGAAAGGAGGATCA4550.26642463988757464No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATGAGACCAAGTCTCTGC4520.26466799391029394No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCACACTCTCAGTTGTGTGTGT4520.26466799391029394No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC4430.25939805597845184No Hit
CATAGATGCTTCTGATATGTTGCCGTACATAGATGCTCAGATCTCAAAAG4320.2529570207284225No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTGGTCATTCTTCTCTGGGGGCT4130.2418315962056447No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGACACTGACGACATGGCT4060.23773275559198967No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT4060.23773275559198967No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACAGTGAAACAAGATCGTGC3980.2330483663192411No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGAGGACACTTTGGACTCTG3960.231877269001054No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGACAGCCGCTCACCTCTATGAGA3890.227778428387399No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA3880.2271928797283054No Hit
CATAGAACATCTACAGAACTCTCTACCCAACACGGACTACAAGTACCCAC3880.2271928797283054No Hit
CATAGAGAACAGCCCTGAGAGAATGCTAGAGAACAGCTAAAAATCTTGGA3840.22485068509193115No Hit
CATAGAATACAACACACTCTCTGCCCTGTACACGGACTACAAGTACCCAC3750.219580747160089No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCAATAGAACAGCTAAAA3700.21665300386462116No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTGCAGCA3640.2131397119100597No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATCGTGCCTCTTGTAGAAGG3600.21079751727368545No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGGTTGCCTTTCCT3590.21021196861459188No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACTCTCAGTTGTGTGTGTGGTCTA3570.20904087129640475No Hit
CATAGAATACAACACACTCTCTGCCCTGATGGTTCTGCACATCTACAAGG3570.20904087129640475No Hit
CATAGATGCTTCTGATATGTTGCCGTATGTTGCCTTTCCTCAGTTCTTTT3470.20318538470546904No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA3470.20318538470546904No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACATGGTTCTACA3360.19674434945543975No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATGGTTCTACACATAGAGAA3240.18971776554631692No Hit
CATAGATGCCTCAAAGAGCTGAAGACACACTGACGACATGGCTCACACCT3210.1879611195690362No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT3140.18386227895538118No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACATGGCTCACACCTA3120.18269118163719406No Hit
CATAGACAGCTGGGGTGGGAGGTTAGAACAGCTAAAAATCTTGGAGCTCT3120.18269118163719406No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATAGGACACTTTGGA3080.18034898700081978No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG3070.1797634383417262No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTCTGCTACCGTAAGACCAAAG3060.17917788968263262No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTTCTACACATAGAACAG3010.17625014638716477No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCTGACGACATGGCTCACACCT2990.17507904906897762No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCACTGACGACATGGCTCACACC2940.1721513057735098No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGGCTCACACCTATAATCCCATC2910.17039465979622906No Hit
CATAGAAGGAGCTGGACTGGATGGACACTGACGACATGGCTCACACCTAT2830.1657102705234805No Hit
CATAGAGAACAGCCCTGAGAGAATGCTACACATAGAGAACAGCTAAAAAT2830.1657102705234805No Hit
CATAGATGATCCATCTACCTCTGCTTCACATGGCTCACACCTATAATCCC2810.16453917320529338No Hit
CATAGAATACAACACACTCTCTGCCCTGCACTGACGACATGGTTCTACAC2730.1598547839325448No Hit
CATAGACTCTGTTTTGCTACCTAGGGTGGGGAAAGAGAGCACTCTATGAG2600.15224265136432838No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACGGACTACAAGTACCCACCAC2570.15048600538704768No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTGCAG2500.14638716477339267No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG2490.1458016161142991No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC2490.1458016161142991No Hit
CATAGAAGTGACCCTCAGCACAGTGAAACAAGATCGTGCCTCTATGAGAC2490.1458016161142991No Hit
CATAGACCAAAGCTAGAAACTCCCATCTATGAGACCAAGTCTCTGCTACC2480.14521606745520554No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT2450.14345942147792481No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACATCATGTCTATGAGAC2420.1417027755006441No Hit
CATAGACTCTGTTTTGCTACCTGGAGACAGCCGCTCACCTCTATGAGACC2410.14111722684155054No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG2370.13877503220517626No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGGTTCTACACA2360.13818948354608268No Hit
CATAGAATACAACACACTCTCTGCCCTGGCTCACACCTATAATCCCATCT2350.1376039348869891No Hit
CATAGAGAACAGCCCTGAGAGAATGCACTGACGACATGGCTCACACCTAT2340.13701838622789553No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATAGGACACTTTGGACTC2340.13701838622789553No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCATGGCTCACACCTATAATCCCAT2340.13701838622789553No Hit
CATAGATCGGTAAGGAATTTGGCTCGAGGCAGAGGACAGGTATCTATGAG2310.13526174025061483No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC2250.1317484482960534No Hit
CATAGATGGAAATTTTTGGCCAGGCGTTCTACACATAGAGGCAGGTGGGT2240.13116289963695985No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGGCTCACACCTATAATCCCAT2220.1299918023187727No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTCTACACATAGAACAGC2170.12706405902330484No Hit
CATAGAATACAACACACTCTCTGCCCTGCATGGCTCACACCTATAATCCC2100.12296521840964984No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGGCTCACACCT2040.11945192645508843No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACACTGACGACATGGCTCAC2010.11769528047780771No Hit
CATAGAGAACAGCCCTGAGAGAATGCCACTGACGACATGGTTCTACACAT1990.11652418315962056No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG1960.11476753718233985No Hit
CATAGAGAACAGCCCTGAGAGAATGGTTCTACACATAGAGAACAGCTAAA1950.11418198852324628No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGTGTAGGCTGAGAAAGGAGGAT1950.11418198852324628No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGGCTCACACCT1940.1135964398641527No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACACACTGACGACATGGCTCA1940.1135964398641527No Hit
CATAGAGGATCCCCTGACATTTTGGTAGAGACAGGGTTTCACTCTATGAG1900.11125424522777842No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA1900.11125424522777842No Hit
CATAGAGCCTCCACTCTTCTCGCTATCCACTGACGACATGGCTCACACCT1820.10656985595502985No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG1800.10539875863684273No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA1790.10481320997774914No Hit
CATAGAAGGAGCTGGACTGGATGGAGACAGCCGCTCACCTCTATGAGACC1760.10305656400046845No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCAAGGGTGGGGAAAGAGAGCA1740.1018854666822813No Hit
CATAGAGGATCCCCTGACATTTTGGTTGACTTGGCTCACACCTATAATCC1710.10012882070500058No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)