FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806640

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806640
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences170780
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT77834.55732521372526No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG64083.752195807471601No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA54403.1853847054690245No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA49732.911933481672327No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA46992.7514931490806886No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG45772.680056212671273No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT37562.1993207635554515No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT37362.18760979037358No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA33401.955732521372526No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT31961.871413514463052No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT31461.8421360815083734No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA27951.63660850216653No Hit
CATAGATGGGATTATAGGTGTGAGCCATGCTGAAGTCCCATGATCTATGT24471.4328375688019674No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC23271.362571729710739No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG23191.3578873404379905No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC22611.3239255182105634No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT20991.2290666354374047No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA20101.176952804778077No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG18531.0850216653003864No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG16620.9731818714135145No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC16530.9679119334816723No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC15630.915212554163251No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT14440.845532263731116No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT13970.8180114767537182No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT11190.6552289495257057No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT9860.5773509778662607No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGAACCATGTCGTCAGTGT9700.5679821993207635No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT9270.5428036069797401No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT9250.5416325096615529No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGCTTACACTGCACATGGG9200.538704766366085No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT8880.5199672092750908No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGGAAACATTG8840.5176250146387165No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG8730.5111839793886872No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTACGGCAACATATCAGAAGC8620.504742944138658No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT8520.49888745754772224No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATTCTGTTTACTCGGAGATTT8170.4783932544794473No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT7910.46316898934301437No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT7840.4590701487293594No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT7060.4133973533200609No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGAACCATGTCGTCAG6940.4063707694109381No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG6780.39700199086544097No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGACCTTTTTC6750.3952453448881602No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT6590.38587656634266304No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAAGAAGTGTATTAAT6430.3765077877971659No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA6420.3759222391380724No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT6160.36069797400163955No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACGATAGCGAGAAGAGTGGAGGCT6150.36011242534254595No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGAGACTTGGTCTCATAGA6110.35777023070617164No Hit
CATAGACCATCCCTTCTACAAGAGGCATACGATAGCGAGAAGAGTGGAGG6110.35777023070617164No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG6110.35777023070617164No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG6060.3548424874107038No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT6010.351914744115236No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGGTGGGTAGAGAGTTC5580.32673615177421245No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCCAGGTAGCAAAACAGAGTCTAT5550.3249795057969317No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT5290.30975524066049887No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGAAGCAGAGGT5280.3091696920014053No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA5220.3056564000468439No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTACGGAAGACACAGCACACTCTTC5150.30155755943318885No Hit
CATAGAAGTACCATCAGAGTGAACAGGCATTCTCTCAGGGCTGTTCTCTA5090.2980442674786275No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCACTGAGCTGAGGGTCACTTCT5080.2974587188195339No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTACTTTTCTAAT4920.2880899402740368No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCAGGGCAGAGAG4770.2793067103876332No Hit
CATAGACACACTGACAATTTGCACCTGGCCAAAAATTTCCATCTATGTGT4730.2769645157512589No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTCAGCTCTTTGAGGCATCTAT4660.27286567513760396No Hit
CATAGAGTGATCCTCCTTTCTCAGCCGGTCTCATAGGGCACTGAGACCAC4560.26701018854666825No Hit
CATAGACCACACACACAACTGAGAGTGTGAGGAAACATTGGAAAGATGGG4510.2640824452512004No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTAGCAGAGACTTGGTCTCATAGA4430.25939805597845184No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATAGGAATCTTTGGGAGGCTAT4410.2582269586602647No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTACGGCAACATATCAGAA4360.2552992153647968No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT4140.24241714486473825No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTCATAGACCTTT4080.23890385291017685No Hit
CATAGAGCAGCATTCTCTCAGGGCTGTTCTCTATGTGTAGAACCATGTCG4080.23890385291017685No Hit
CATAGAGCCCCCAGAGAAGAATGACCAGCCCCCAGGTAGCAAAACAGAGT4010.23480501229652181No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCAGTGTCCCCAGGTAGCAAAACAG3950.23129172034196044No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC3880.2271928797283054No Hit
CATAGAGGCACGATCTTGTTTCACTGTGATCTACAGTTTCAATACTATGC3850.2254362337510247No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA3770.22075184447827612No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCTCTCAGGGCTGTTCTCTATGTGT3760.2201662958191826No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGCATTCTCTCAGGGCTGT3730.21840964984190187No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTTGGGTAGAGAGTTCTGTAG3610.211383065932779No Hit
CATAGACCACACACACAACTGAGAGTCTTGCTCCTTCTCACACAAATCTA3590.21021196861459188No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCATAGACTCTGTTTACTCGGAG3580.20962641995549827No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTACAGGGCAGAGAGTGTGTT3540.20728422531912402No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATACGGCAACATATCAGAAGCA3490.20435648202365617No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATTGAGAAGTGTATTAATTAT3470.20318538470546904No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTGTTTACTCGGAGATTTG3440.2014287387281883No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACTTGGTCTCATAGAGGAGAATGA3400.19908654409181403No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCATCAGGGCAGAGAGTGT3390.19850099543272048No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATCTGTT3120.18269118163719406No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGTCTTCAGCTC3070.1797634383417262No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGGGAAAGGTAT3060.17917788968263262No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAACCTCCCACCCCAGCTGTCT3040.1780067923644455No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG3000.17566459772807122No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTATAGACTCTGTTTACTCGGAGATT2970.1739079517507905No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAAAGAAGTGTATT2910.17039465979622906No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG2910.17039465979622906No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCAACCAAAATGT2830.1657102705234805No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGAGGAAACATTGGAA2820.16512472186438693No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTACGGTAGCAGAGACCTTTTTC2820.16512472186438693No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTGAAGCAGAGGTAGATGGATC2780.16278252722801265No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCTTCAGCTCTTTGAGGCATC2780.16278252722801265No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGCATTCTCTCAG2750.16102588125073192No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTCCATCCAGTCC2740.16044033259163837No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGAACCATGTCGTCAGTGC2570.15048600538704768No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC2530.14814381075067337No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGGTAGCAAAACAGAGTCTATGTG2500.14638716477339267No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCAGGTAGCAAAACAGAGTCTATG2440.14287387281883127No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA2420.1417027755006441No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTTCTATGTGTA2400.14053167818245696No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGTAGCAAAACAGAGTCTATGTGTAG2370.13877503220517626No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCCCCAGGTAGCAAAACAGA2360.13818948354608268No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTAGAACCATGTCGTCA2290.13409064293242767No Hit
CATAGATGGGATTATAGGTGTGAGCCATGAGGAGGAGCTGACTTACTGTT2280.13350509427333412No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA2260.13233399695514697No Hit
CATAGACATGATGTGCTATGAAGCAGAGGTAGATGGATCATCTATGTGTA2250.1317484482960534No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGACTTGGTCTCATAGAGGAGAAT2250.1317484482960534No Hit
CATAGATGGGATTATAGGTGTGAGCCAGGGCAGAGAGTGTGTTGTATTCT2240.13116289963695985No Hit
CATAGATACCTGTCCTCTGCCTCGAGCCAAATTCCTTACCGATCTATGTG2230.13057735097786624No Hit
CATAGATGGGATTATAGGTGTGAGCCAGGAAACATTGGAAAGATGGGGAT2210.12940625365967912No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTATAGAGGAGAATGATATTGTTGCA2160.12647851036421126No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCATTCTCTCAGG2130.12472186438693056No Hit
CATAGATGGGATTATAGGTGTGAGCCATGCAGGGCAGAGAGTGTGTTGTA2070.12120857243236913No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAAGAAGTGTATTA2060.12062302377327555No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACACATAGGAGGAGCTGACTTAC2040.11945192645508843No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATTCTCT1990.11652418315962056No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTACGGCAACATA1960.11476753718233985No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGGAGGAGCTG1950.11418198852324628No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA1940.1135964398641527No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG1860.10891205059140414No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGATCTACAGTT1860.10891205059140414No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGTATATCTAGG1840.107740953273217No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA1800.10539875863684273No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCAGTCCAGCTCCTTCTATGTGTAG1780.10422766131865557No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAATGTCAGGGGATCCTCTATGTG1770.10364211265956201No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG1710.10012882070500058No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)