FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806649

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806649
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences117750
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG99038.410191082802548No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA55164.684501061571125No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA50924.324416135881104No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA42023.568577494692144No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG39943.391932059447983No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG31252.6539278131634823No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT20721.7596602972399151No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT20561.746072186836518No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG19601.6645435244161357No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA15051.2781316348195328No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA14051.1932059447983014No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG13321.1312101910828025No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA12321.0462845010615711No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACATTAGCTTAGTTAATTAGGG10670.9061571125265393No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA10060.8543524416135881No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA9650.8195329087048833No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC9200.7813163481953291No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT9100.772823779193206No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA9010.7651804670912951No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT8780.745647558386412No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC8500.7218683651804672No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA7840.6658174097664543No Hit
CATAGATGTGCCACATACCTTTCCCAGGTGCAAATTGTCAGTGTGTCTAT7530.6394904458598726No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA7500.6369426751592357No Hit
CATAGAATACAACACACTCTCTGCCCTGGTGGAGGGCTTTGCTGTTTCTA7110.6038216560509555No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA7010.5953290870488323No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC6890.5851380042462845No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCTCCCTCATTATCCCTGT6540.5554140127388535No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA6390.5426751592356688No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA6000.5095541401273885No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC5700.4840764331210191No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATAGAGAACAGCTAAAAATC5670.48152866242038217No Hit
CATAGATGCTTCTGATATGTTGCCGTACCTCTAACTTCATAGCACATCAT5560.4721868365180467No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT5440.461995753715499No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG5330.45265392781316344No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAACAGCTAAAAATCTTGG5250.445859872611465No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTACGGAGATAGAGAGGTTGGT4890.4152866242038217No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT4870.413588110403397No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT4690.39830148619957534No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCACTGACGACATGTGTGAG4240.3600849256900212No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG4210.3575371549893843No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGTACAGTGAAACAAGATC4130.35074309978768575No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCACATCTACAAGGACACTCATCT4110.3490445859872611No Hit
CATAGATGCTTCTGATATGTTGCCGTGCACAACTGGCATCTGGTGATCTA3920.33290870488322716No Hit
CATAGATGTGCCACATACCTTTCCCAACTTAGCAACCTGTACATTTCGTC3880.3295116772823779No Hit
CATAGAGAACAGCCCTGAGAGAATGCATTCCTAGGGGGAGGTCTCTAAAA3850.32696390658174096No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC3840.3261146496815287No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACAGGTGCAAATTGTCAGTGT3640.30912951167728236No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTAATGGAGGAGTATGGGATCTA3630.30828025477707005No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT3630.30828025477707005No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCCTTGGAGAGAAATGCTGCT3610.3065817409766454No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCGAGGCAGAGGACAGGTATCT3590.30488322717622085No Hit
CATAGATGCTTCTGATATGTTGCCGTACAGTGAAACAAGATCGTGCCTCT3580.3040339702760085No Hit
CATAGACCTGTGTGTGAGGCATTGTTAGACATGTGTGAGAGGGAAGGACT3560.30233545647558385No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATTTACTGACATGGGCAATTCG3550.30148619957537154No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC3530.2997876857749469No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAACCTCGAGGCAGAGGACA3500.29723991507431No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT3480.29554140127388534No Hit
CATAGATGTGGTCTCAGTGCCCTATGCACATCTACAAGGACACTCATCTA3470.294692144373673No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGTGTGAGAGGGAAGGACTCTAT3470.294692144373673No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACGGTCCAGTGAACTCAAGGG3440.2921443736730361No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGCCTCTTGTAGAAGGGA3420.29044585987261146No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG3400.28874734607218683No Hit
CATAGATGCTTCTGATATGTTGCCGTACATGTGTGAGAGGGAAGGACTCT3380.2870488322717622No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGACCAAAGCTAGAAACTCCC3370.2861995753715499No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAACTCTCAGTTGTGTGTGTGGTC3260.27685774946921443No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC3220.2734607218683652No Hit
CATAGACCACCGTGCCCAGATAAGTTACACGGACTACAAGTACCCACCAC3190.27091295116772823No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGGGTGGGGAAAGAGAG3180.2700636942675159No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGGGTGGGGAAAGAGAGCACTCT3140.26666666666666666No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTACACAGAACAGCTAAAAATCTT3070.26072186836518046No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGACATGTGTGAGAGGGAAGGA3030.2573248407643312No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGGGTAATGGAGGAGTATGGGAT3030.2573248407643312No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCCTGAACCAACCTGCAGGGGCCT3000.25477707006369427No Hit
CATAGATGTGCCACATACCTTTCCCAGACAGGGTAATGGAGGAGTATGGG2990.25392781316348195No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGATTTACTGACATGGGCAAT2810.23864118895966033No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT2810.23864118895966033No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC2790.23694267515923564No Hit
CATAGATGCTTCTGATATGTTGCCGTATGGTGGAGGGCTTTGCTGTTTCT2780.23609341825902336No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA2720.2309978768577495No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG2670.2267515923566879No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG2670.2267515923566879No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGGGCTGAGAAAGGAGGATCA2590.2199575371549894No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGAGAGGAGGGGGCAGAATA2570.21825902335456476No Hit
CATAGACCTGTGTGTGAGGCATTGTTCACACGCACAACTGGCATCTGGTG2530.2148619957537155No Hit
CATAGATCATGGGACTTCAGCATGGCTAACTTAGCAACCTGTACATTTCG2430.20636942675159234No Hit
CATAGACTCTGTTTTGCTACCTGGGGACTACAAGTACCCACCACCTCTAT2390.2029723991507431No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGGGCTGAGAAAGG2370.20127388535031848No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACTGACGACATGGTTCTA2360.20042462845010614No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGAAACAAGATCGTGCCTCTAT2340.19872611464968154No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACATAGAACAGCTAAAAA2320.1970276008492569No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAACAGCTAAAAATCTTGGAG2300.19532908704883228No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTGGTCATTCTTCTCTGGGGGCT2290.19447983014861994No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGTGTGAGAGGG2280.19363057324840763No Hit
CATAGAACAGTAAGTCAGCTCCTCCTAATTAACTTAGCAACCTGTACATT2250.1910828025477707No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGGAGAGGAGGGGGCAGAATATCT2240.1902335456475584No Hit
CATAGATGATCCATCTACCTCTGCTTCAACACGGACTACAAGTACCCACC2180.1851380042462845No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTGAGAAAGGAGGATCACTCTAT2170.1842887473460722No Hit
CATAGAACATCTACAGAACTCTCTACCCACCCATAGAACAGCTAAAAATC2170.1842887473460722No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA2170.1842887473460722No Hit
CATAGACCCCATGTGCAGTGTAAGCTGGTTCTACACATAGACATGTGTGA2080.17664543524416138No Hit
CATAGATGTGCCACATACCTTTCCCATAGACCAAAGCTAGAAACTCCCAT2080.17664543524416138No Hit
CATAGATGCCTCAAAGAGCTGAAGACACAGCCAGGTGCAAATTGTCAGTG2060.17494692144373675No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGCTACCGAAGACCAAAGCTAG2060.17494692144373675No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2060.17494692144373675No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGTGGAGGGCTTTGCTGT2050.1740976645435244No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGACACTTTGGACTCTGCC2040.1732484076433121No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTCAGGTGCAAATTGTCAGT2010.17070063694267515No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT2010.17070063694267515No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGGTTCTACACATAGAACAGC2000.16985138004246286No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGACACTTTGGACTCTGCCTCTAT2000.16985138004246286No Hit
CATAGAGCCTCCACTCTTCTCGCTATCTACGGAGATAGAGAGGTTGGTTC1960.16645435244161358No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATACTCTCAGTTGTGTGTGT1950.16560509554140126No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCTCTATGAGACCA1920.16305732484076435No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACATGGTTCTACACAT1900.1613588110403397No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG1900.1613588110403397No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG1870.15881104033970275No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAATTTGCAAATACAGAATCAGTG1860.15796178343949044No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1830.15541401273885352No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGCACAACTGGCATCTGGTGATCTAT1760.1494692144373673No Hit
CATAGAGGATCCCCTGACATTTTGGTTGATCTCCCTAATTAACTTAGCAA1730.14692144373673036No Hit
CATAGATCACCCAGCCCATATTGCACTCTCAGTTGTGTGTGTGGTCTATG1730.14692144373673036No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGGACACTTTGGACTCTGCCTCT1710.14522292993630573No Hit
CATAGATGTGCCACATACCTTTCCCAGTGTTGCCTTTCCTCAGTTCTTTT1700.14437367303609341No Hit
CATAGATGCTCAGATCTCAAAAGGCTTCTATGAGACCAAGTCTCTGCTAC1690.1435244161358811No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGCAGCAACAAAAGTCA1680.14267515923566879No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC1680.14267515923566879No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTCTACACATAGACCAAAGCTA1660.14097664543524416No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA1640.13927813163481953No Hit
CATAGACCCCATGTGCAGTGTAAGCTCCCTCATTATCCCTGTGCCTCTAT1620.1375796178343949No Hit
CATAGATGCTTCTGATATGTTGCCGTAGTTGCCTTTCCTCAGTTCTTTTT1620.1375796178343949No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT1590.13503184713375796No Hit
CATAGACATGTGTGAGAGGGAAGGACTCTATGAGACCAAGTCTCTGCTAC1590.13503184713375796No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTACACATAGAACAGCTA1570.13333333333333333No Hit
CATAGAACATCTACAGAACTCTCTACCCACCAGGTGCAAATTGTCAGTGT1550.1316348195329087No Hit
CATAGATGTGCCACATACCTTTCCCAGGCAGGAGGGTAATGGAGGAGTAT1530.12993630573248408No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT1530.12993630573248408No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTAATGGAGGAGTATGGGATC1510.12823779193205945No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTGGAGAGGAGGGGGCAGAA1490.12653927813163482No Hit
CATAGACCCCATGTGCAGTGTAAGCTCTATGGAGAGGAGGGGGCAGAATA1490.12653927813163482No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1490.12653927813163482No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACAAGGACACTTTGGACTCTG1450.12314225053078556No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACGGACTACAAGTACCCAC1400.11889596602972399No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGATCTCCCTCATTATCCCTGTG1360.11549893842887475No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGACGACACGGACTACAAGT1360.11549893842887475No Hit
CATAGATGCCTCAAAGAGCTGAAGACATCGAGGGTGGGGAAAGAGAGCAC1330.1129511677282378No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGATAGAACAGCTAAAAATCTTGGAG1300.11040339702760085No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGGTTCTACACA1300.11040339702760085No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA1280.10870488322717621No Hit
CATAGACTCTGTTTTGCTACCTGGGGGACTACAAGTACCCACCACCTCTA1280.10870488322717621No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGCACATCTACAAGGACACT1260.10700636942675158No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTTCTACACATAGAACAG1250.10615711252653928No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1230.10445859872611465No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG1210.10276008492569003No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1200.1019108280254777No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGACGACATGGTTCTAC1190.10106157112526538No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACATAGATCTCCCTCATTATCCCT1190.10106157112526538No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG1180.10021231422505307No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)