FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806654

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806654
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45769
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA731115.973693985011689No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA500310.930979483930171No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCGCCAC18374.013633682186633No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGAAAG17913.9131289737595316No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA7521.643033494286526No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTTGTATATCT7161.56437763551749No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT5431.1863925364329568No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA5301.1579890318774717No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA5181.131770412287793No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT4741.0356354737923048No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG4540.9919377744761738No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTCTACT4100.8958028359806856No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA3780.8258865170748759No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT3160.6904236491948699No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCTGCTAT3140.6860538792632568No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCAC2690.587734055801962No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA2570.5615154362122834No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCACCAC2560.5593305512464768No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG2500.5462212414516375No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAATTTGTTAAAAGAGG2450.5352968166226049No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA2200.48067469247744105No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAGATCA2190.47848980751163456No Hit
CATAGATGCATCAGCAACTCACAGATTACACTGGGGACTGTGACTCTGTT2100.4588258428193755No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGCGCATGCTTG2040.44571653302453623No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTCAAA2010.4391618781271166No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCGCCAC1700.3714304441871136No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG1530.33428739976840216No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCTGCCAC1520.33210251480259567No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT1490.325547859905176No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCAC1470.3211780899735629No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA1470.3211780899735629No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCAC1470.3211780899735629No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGGTCAGGAGATTGAGACCATCCTG1460.31899320500775635No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCAC1410.3080687801787236No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAGAAGTCAAATTGTCC1400.30588389521291703No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACGACAGCCCGGCTACTG1370.2993292403154974No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCTGCGAC1210.2643710808625926No Hit
CATAGATGAAAAGTCAAGCCAGCACACTCTAGCAGATCACGAGGTGAGGA1180.25781642596517296No Hit
CATAGATTGAGCTTAAATGATCTGTGCAACCGTATTCATCCCATCAACTT1170.2556315409993664No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTTCCTGCCAC1150.25126177106775327No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTGCCAC1130.24689200113614018No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTGCCATGCTGAAGTCCCATGAT1110.2425222312045271No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCACACCAC1080.23596757630710746No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGTACCACAGGCATGTGCCAC1070.23378269134130086No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG980.2141187266490419No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT960.20974895671742882No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGCGATTACAGGCGCCTGCCAC950.20756407175162228No Hit
CATAGAGCAGAAAACCTTTGAATAACAGACATAGAGCAGGAATTAGACTC910.1988245318883961No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTAGTGAAATTCCTGAGGTCAGG880.19226987699097642No Hit
CATAGAGTTCAAATGGCCAATCAGGTCTTGGTCTCATAAATTCAACAGGC830.18134545216194367No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGCCATGCGCCAC780.17042102733291092No Hit
CATAGACTGCCTCAGCCTCCTGAGTACCTGGGACTACAGGTGCCTGCCAC780.17042102733291092No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGTTGGGGCCACAGGCATGAGCCAC780.17042102733291092No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTAGGATTATAGGTATGCACCAC770.16823614236710435No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCACACCAC760.16605125740129784No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCACCAC740.16168148746968472No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCGCCAC710.15512683257226506No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGCATGTGCCAC690.15075706264065197No Hit
CATAGACTGCCTCAGCCTCCTGAGTAACTGGAATTACAAGCCCATGCCAC690.15075706264065197No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTATAGGTACTAATTTT690.15075706264065197No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCCGCCAC690.15075706264065197No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGCACCAC680.1485721776748454No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGTGTGTGCCAC680.1485721776748454No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGTGCACCAC670.14638729270903889No Hit
CATAGAAGCAGGATGAAAACATGGTACAGCTTCCACATGATGGACATCTA670.14638729270903889No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCACC660.1442024077432323No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGGTTACAGGTGTGTGCCAC660.1442024077432323No Hit
CATAGAATCCTTTCCCCATTGCTTGTTGTCTGTGACAGCTTGTATACATC650.14201752277742577No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTATAGGCATGTGCCAC650.14201752277742577No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT650.14201752277742577No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACGGGAGCATGCCAC640.1398326378116192No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAAGCACCCGCCAC640.1398326378116192No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACATGCCAC620.1354628678800061No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTATAGGCGTGTGCCAC590.12890821298258648No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACATGCCGC590.12890821298258648No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTGCACCAC590.12890821298258648No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGTTGGGACTACAGGCACGTGCCGC580.1267233280167799No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTAGGATTACAGGTGTGCATCAC580.1267233280167799No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGTGCCAC580.1267233280167799No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCATGTGCCAC570.12453844305097338No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGTTGGGACTACAGGTGTGCGCCAC570.12453844305097338No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTACAGGCGTGTGCCAC550.12016867311936026No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAAGCACACACCAC550.12016867311936026No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCAGGGATCACAGGTGTGTGCCAC550.12016867311936026No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCTGCCAC530.11579890318774717No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCTCACCAC530.11579890318774717No Hit
CATAGAATCCTTTCCCCATTGCTTGTTGTTGTCAGGTTTGTCAAAGATAA520.11361401822194062No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTATAGGCACGAACCAC520.11361401822194062No Hit
CATAGATGCATCAGCAACTCACAGATTGCATAGCCATGCTGAAGTCCCAT520.11361401822194062No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTAGGATTATAGGTTCATGCCAC510.11142913325613406No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAGGATCA500.10924424829032751No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAAGTACAGGCACGCACATC500.10924424829032751No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACCACAGGCGAGCACCAC490.10705936332452096No Hit
CATAGACTGCCTCAGCCTCCTGAGTAACTGGGATTACAGGTGCATGCCAC490.10705936332452096No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGCACACCACTA480.10487447835871441No Hit
CATAGATTTAAAATAAAATTCCTGGATAGATCAGTGTGGTTGTCTGGGTG480.10487447835871441No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCGCCAG470.10268959339290787No Hit
CATAGACTGCCTCAGCCTCCTGAGTACCTGGGACCACAGTTGTGTGCCAC460.10050470842710131No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)