FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806660

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806660
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95191
Sequences flagged as poor quality0
Sequence length150
%GC46

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3636438.2010904392222No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG62486.56364572280993No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG41224.330241304324989No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT26592.7933313023290016No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG20522.1556659768255404No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA15241.600991690390898No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT9941.0442163649924887No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT9791.028458572764232No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG9350.9822357155613451No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG8190.8603754556628253No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT8100.850920780325871No Hit
CATAGAAGCAGCATTGATCATCCTCCAGAGACTTGGTCTCATAGAAGCAG7350.7721318191845867No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG7240.7605761048838651No Hit
CATAGACCATCTGCGCATCCTGTCTGTACACATAGACACATGTAGGATGG6740.7080501307896755No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAGGGATAGTTTGAGGGT5370.5641289617715961No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACTCCTAT5220.5483711695433392No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC5170.5431185721339202No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA4820.5063503902679874No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG4370.45907701358321695No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA3990.41915727327163277No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA3880.4076015589709111No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC3730.39184376674265425No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA3610.37923753296004875No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG3590.3771364939962812No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG3580.37608597451439735No Hit
CATAGAGGGACGGAGGCAAGAGGATACGGTAGGGATAGTTTGAGGGTAAT3290.34562090953976743No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC3270.3435198705759998No Hit
CATAGAGTTTTGTTCCCTTGCTGGCAAGGAGCTGCGATCCTTTGGAGGAG2990.3141053250832537No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT2950.3099032471557185No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG2950.3099032471557185No Hit
CATAGAGTTTTGTTCCCTTGCTGGCAAGGAGTTGTGATCCTTTGGAGGAG2840.29834753285499677No Hit
CATAGACTCAAGAAACTTACAATCATGGCATGTAGGATGGGTTTTTGCCA2810.2951959744093454No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAGGGATAG2760.28994337699992645No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG2520.26473090943471544No Hit
CATAGAACATCGCACACACATGGAACCATGTCGTCAGTGTACTCCTATGT2400.25212467565210994No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGAGGCACTTGGTCCAGA2210.23216480549631793No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1930.20275026000357177No Hit
CATAGAGAATACAATGAACTGTGATGGCATTGCTCTTTGACTTATGATGG1920.20169974052168796No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG1910.20064922103980418No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1830.19224506518473386No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG1800.18909350673908248No Hit
CATAGACCATCCTCCCACCTTGACCTTCCCGGTAGCTGGGACTACAGGCA1740.18279038984777973No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA1740.18279038984777973No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGGGCTGGGATGACACGCA1710.17963883140212836No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGTCTAGGGATAGTTTGAGG1710.17963883140212836No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTACTGGGATTATAGGCG1690.17753779243836076No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1690.17753779243836076No Hit
CATAGACCATCCTCCCACCTTGACCTCCCCAGTGCTGGAATTACAGGAGT1650.1733357145108256No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGTATTACAGGTG1630.171234675547058No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATGACAGGCA1590.16703259761952285No Hit
CATAGAGTTTTGTTCCCTTGCTGGCAGGAGTTGTGATCCTTTGGAGGAGA1580.16598207813763907No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1540.16178000021010389No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1410.1481232469456146No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG1400.14707272746373082No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT1400.14707272746373082No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAAGTGCTGCGATTACAAGCA1380.14497168849996322No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTTGGATTACAGGTG1380.14497168849996322No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGGCACTTGGTCCAGACT1340.14076961057242807No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG1320.13866857160866047No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1300.1365675326448929No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1280.13446649368112532No Hit
CATAGACTCAAGAAACTTACAATCATGGCATTGCTCTTTGACTTATGATG1270.13341597419924153No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACAGAAG1260.13236545471735772No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGGCTTGTGAGGGCTGAAGT1250.13131493523547394No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAATGCTGGGATTACAGGCG1210.12711285730793878No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1200.12606233782605497No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1200.12606233782605497No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGAATTACAGATG1190.1250118183441712No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAATTTCTGGGATTACAGGGG1190.1250118183441712No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1170.12291077938040361No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTTCTAGGATTACAGACA1140.11975922093475223No Hit
CATAGACCATCTGCGCATCCTGTCTGGCTTCCCTGCTTGTCTTTCATCTA1140.11975922093475223No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1130.11870870145286844No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACAGGCA1110.11660766248910086No Hit
CATAGACCATCCTCCCACCTTGACCTGGCAAGGCTTGTGAGGGCTGAAGT1090.11450662352533328No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGATAGGGATAGTTTGAG1090.11450662352533328No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTGTTGGGATTATAGGCGT1080.11345610404344948No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATCTTCCACAAAGCAAGCA1070.1124055845615657No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1070.1124055845615657No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTGGGATTACAGGTG1060.1113550650796819No Hit
CATAGACCATCTGCGCATCCTGTCTGCTCTATGTGTAGAACCATGTCGTA1060.1113550650796819No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGGG1050.1103045455977981No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAATGCTAGGATTATAGGAG990.10400142870649536No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAAGCG970.10190038974272778No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTATAGGCA970.10190038974272778No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)