FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806676

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806676
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104479
Sequences flagged as poor quality0
Sequence length150
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1194911.436748054632988No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT41673.9883612974856195No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA34463.2982704658352393No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG33873.2417997875171087No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA27802.66082179193905No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT21102.0195445974789195No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA20511.9630739191607884No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT15631.4959944103599767No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA14621.3993242661204643No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA14541.3916672249925823No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG13281.2710688272284383No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA12771.2222551900381895No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG10320.9877583054967984No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA9840.9418160587295055No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA9550.9140592846409326No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT9090.8700312981556102No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT7300.698705002919247No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT6580.6297916327683075No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT6220.5953349476928378No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC6080.581935125719044No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT5760.5513069612075154No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT5610.5369500090927363No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA5570.5331214885287953No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTTTACTCGGAGATTTGACTGT5390.5158931459910604No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT5360.5130217555681046No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG5190.496750543171355No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG5030.48143646091559067No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT4950.47377941978770854No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT4410.42209439217450395No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT4150.3972090085088869No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC4100.3924233578039606No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTACGGCAACATATCAG4070.3895519673810048No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTGAGGAGAATGATAT4060.38859483724001953No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG4040.38668057695804897No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC4020.3847663166760784No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC3890.3723236248432699No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT3840.3675379741383436No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAAGTGTATTAATT3690.35318102202356455No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA3670.351266761741594No Hit
CATAGAGCCCCCAGAGAAGAATGACCGCCCCCAGGTAGCAAAACAGAGTC3650.3493525014596235No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC3610.34552398089568237No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCACTATTCTCTGGCCCGTCTAT3570.3416954603317413No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT3300.315852946525139No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC3220.3081959053972569No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3180.30436738483331577No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGCCCCAGGTAGCAAAACAG3160.30245312455134526No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT3090.29575321356444834No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC3070.29383895328247783No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGGGAAAGGTATGTGGCA3060.2928818231414926No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT2910.2785248710267135No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACCTCTAGCCAAATTCCTTAC2900.2775677408857283No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2780.266082179193905No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGGCAACATATCAGAAGCA2670.25555374764306704No Hit
CATAGATCCCATACTCCTCCATTACCCTAACCTCCCACCCCAGCTGTCTA2560.24502531609222905No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTATAGAAGTGTATTAA2550.2440681859512438No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGCTTACACTGCACATGGG2430.23258262425942056No Hit
CATAGAAACAGCAAAGCCCTCCACCATAGTCCATCCAGTCCAGCTCCTTC2400.22971123383646475No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA2360.22588271327252368No Hit
CATAGATCACCAGATGCCAGTTGTGCTACGGCAACATATCAGAAGCATCT2300.22013993242661206No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT2210.21152576115774463No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGTAACAATGCCTCACAC2060.19716880904296555No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAATCTTTGGGA1910.18281185692818652No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTGGTGATCTAGAGGAGAATGAT1900.18185472678720124No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA1880.1799404665052307No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG1820.1741976856593191No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGCAACATATCAGAAGCATCTA1770.16941203495439275No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTACGGCAACATATCAGAAGCATCT1740.16654064453143694No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1740.16654064453143694No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1700.16271212396749585No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA1670.15984073354454004No Hit
CATAGAGGCACAGGGATAATGAGGGAGCATAGGGCACTGAGACCACATCT1610.15409795269862844No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCCCAGGTAGCAAAACAGAGTCTA1590.15218369241665788No Hit
CATAGACCATCCCTTCTACAAGAGGCAGAATCTTGCTCCTTCTCACACAA1590.15218369241665788No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT1570.15026943213468735No Hit
CATAGAAACAGCAAAGCCCTCCACCACGCCTGGCCAAAAATTTCCATCTA1540.14739804171173154No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGAGGAGCTGACTTACTGTTCTA1540.14739804171173154No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACGATAGCGAGAAGAGTGGAGGCT1480.14165526086581992No Hit
CATAGAAACAGCAAAGCCCTCCACCACAACAATGCCTCACACACAGGTCT1460.1397410005838494No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGC1450.13878387044286414No Hit
CATAGAGTCCTTCCCTCTCACACATGTGAGTCCATCCAGTCCAGCTCCTT1440.13782674030187886No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1400.13399821973793777No Hit
CATAGATCACCAGATGCCAGTTGTGCCTCTAGCCAAATTCCTTACCGATC1380.1320839594559672No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA1360.13016969917399668No Hit
CATAGATATTCTGCCCCCTCCTCTCCGTCTCATAGAGCAGCATTCTCTCA1350.12921256903301143No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT1350.12921256903301143No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTCAGCTCTTTGAGGCATCTAT1300.12442691832808507No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTAACCTCCCACCCCAGCTGTCTAT1290.1234697881870998No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1290.1234697881870998No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA1270.12155552790512926No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGATAGCGAGAAGAGT1240.11868413748217345No Hit
CATAGACCCCCTTGAGTTCACTGGACGACTTGGTCTCATAGACCCCCTTG1230.11772700734118818No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATTCTCT1210.11581274705921765No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGGCAGAGAGTGTGTTGTATTCT1160.1110270963542913No Hit
CATAGACCATCCCTTCTACAAGAGGCAACCAAAATGTCAGGGGATCCTCT1140.10911283607232077No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGAGAATGATATTGT1140.10911283607232077No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGCAATATGGGCTGGGTG1120.10719857579035022No Hit
CATAGAGGCACGATCTTGTTTCACTGTCATAGGGCACTGAGACCACATCT1120.10719857579035022No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC1110.10624144564936495No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1100.10528431550837966No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT1080.10337005522640913No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGGAGCTGACTTACTGTTCTAT1070.10241292508542385No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGGCATTCTCTCAGGG1060.10145579494443858No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT1060.10145579494443858No Hit
CATAGAGGCACGATCTTGTTTCACTGTAGACTTGGTCTCATAGGGCACTG1060.10145579494443858No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)