FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806682

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806682
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70443
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA67199.53820819669804No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG60738.621154692446375No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG54387.719716650341411No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG48496.883579631759011No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG29634.206237667333873No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC25153.5702624817228115No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG20882.9640986329372683No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT20542.9158326590292862No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA17472.4800193063895635No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT16792.3834873585735985No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT15332.176227588262851No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC14292.02859049160314No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA14222.0186533793279673No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT13801.9590307056769303No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG12951.8383657709069745No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT11921.6921482617151455No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT11511.6339451755319905No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG11201.5899379640276534No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT7321.039138026489502No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT6480.9198926791874281No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA5980.8489133057933365No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT4880.6927586843263347No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC4210.5976463239782519No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT4090.58061127436367No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT4040.5735133370242608No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT4020.5706741620884971No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAACTGGCTTGATTGCAC3920.5564782874096788No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTAGCAGGCCCTTCAGCATCA3870.5493803500702695No Hit
CATAGAAGTATTCACACTGGGGCCCAAGTCTATGATGGGAGTGTCTGCTG3830.5437020001987423No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC3540.502533963630169No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT3200.45426798972218674No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG3170.45000922731854126No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC2940.41735871555725906No Hit
CATAGATCTCACAGAAACTTCCTTGATGACAGCCCGTTCTCTCTGTTGTG2440.34637934216316735No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAAGAAATGTTGGTCTATGTG2270.3222463552091762No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGGAACAACAACAAAACTCGTG1900.26972161889754837No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT1780.25268656928296634No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG1780.25268656928296634No Hit
CATAGACCCCATGACTCAGCTCCTCAGCCCGTTCTCTCTGTTGTGTCTAT1760.24984739434720268No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAAGACCAACATGCTTTTAGT1680.23849069460414804No Hit
CATAGATGGCCCAGAATCCTTTGTAGACCAGGTGGGTTGAGGGAGTCTTC1550.22003605752168418No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC1500.21293812018227504No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGAGCATGCCTTTGA1490.2115185327143932No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACAGTTGTGGAAAGTGCAATGA1460.2072597703107477No Hit
CATAGAGCAACCCCAGCAGTTTGAGACACAGTTGTGGAAAGTGCAATGAG1460.2072597703107477No Hit
CATAGATCTAGCCCATCACTTCAGCATCAACCAACATGCTTTTAGTCACG1440.20442059537498403No Hit
CATAGACCAGTACGCCTTACCCCTTGGACATGGGTCATTGTGAGGATTAA1440.20442059537498403No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGCTGGAATAGTTGGACTCTATGT1370.1944834830998112No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG1360.19306389563192936No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGACCATGGAGAGAATA1270.18028760842099287No Hit
CATAGAAGTATTCACACTGGGGCCCAGTGTGAGTCTGAGAAAAGATGCAG1230.17460925854946552No Hit
CATAGACCAGTTACCACAAGAAGCAATGACACTGACGAATGAGGAAACAG1210.17177008361370186No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA1180.16751132121005638No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC1160.1646721462742927No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTTGATGTTCGCACCCA1160.1646721462742927No Hit
CATAGATGGTATTTGAGTGGGGAAACAGATCCAAACCATATCATACCCCA1140.16183297133852903No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCATGTCGTCAGTGTTGG1130.16041338387064719No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCTGCGGCACGGCTTGGGCTGGTGT1030.14621750919182885No Hit
CATAGATCTAGCCCATCACTTCAGCATCAGCAGGCCCTTCAGCATCATTT1010.1433783342560652No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGGCAGGCCC970.13769998438453787No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATCTATGCCCATTGTAGATTT970.13769998438453787No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGCAGGCCCTTCAGC960.13628039691665603No Hit
CATAGATCTAGCCCATCACTTCAGCATCATGCAGGCCCTTCAGCATCATT950.13486080944877418No Hit
CATAGATTCCTCCAAAGACTGCAGGGTGGGTTGAGGGAGTCTTCTCTATG880.12492369717360134No Hit
CATAGAAGGAACAGCAGAGAGGGCAGACCATGGAGAGAATAATCCGTCTA850.12066493476995585No Hit
CATAGATGGCAAATGGTGGGATCTCTGGTGGGTTGAGGGAGTCTTCTCTA850.12066493476995585No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA810.11498658489842851No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCAATGAGTCTACAGTTG780.11072782249478301No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGGCAGGCCCTTC770.1093082350269012No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)