FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806684

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806684
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences124072
Sequences flagged as poor quality0
Sequence length150
%GC35

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT1252610.09575085434264No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG91507.374750145077052No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA75546.0884002837062345No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA66295.342865432974402No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG59884.826229931007802No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG56454.549777548520214No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA55434.467567219034109No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG51694.166129344251725No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT45173.6406280224385843No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT39793.207008833580502No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT36442.9370043200722162No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG31172.5122509510606745No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT22831.8400606099684056No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT19751.5918176542652656No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT17671.4241730608034044No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT16301.3137533045328518No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA15331.235572893158811No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT14671.1823779740795668No Hit
CATAGAGCCATCATCATTTCTCACCCAGAAGCTTTGAGATTTGTGTCTGT14331.1549745309175317No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC13011.0485846927590432No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG11800.9510606744470953No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG10840.8736862466954671No Hit
CATAGATAGCAGCAATCTCAGGCCTCTATGAGGTAAACAAACTTCTGGCC9350.7535946869559611No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCATGACCTTAGC9060.7302211619059901No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGTATGCAGTCTGTGAGCTGTC9030.7278032110387517No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA8850.7132955058353214No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT8070.6504287832871236No Hit
CATAGAACCAACCCTGATTCTGCTGGAGACCCCATATCTACCAAAGATCT5790.4666645173770069No Hit
CATAGATCTCAAACAGCCTCTCCCAGGTAAACAAACTTCTGGCCCTCTAT5690.45860468115287895No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG5190.4183055000322394No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA5190.4183055000322394No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA4210.33931910503578566No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG4090.32964730156683214No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT4010.3231994325875298No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC3730.30063189115997163No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG3470.279676316977239No Hit
CATAGATCAAGGTGTGAGCATGGTCCGTACAGTATGCAGTCTGTGAGCTG3440.2772583661100006No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC3430.27645238248758786No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCAAAAGCACAAGGGAGAATCT3430.27645238248758786No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAACCTGTGTATATTCTCCT3360.2708104971306983No Hit
CATAGAACCAACCCTGATTCTGCTGGAGGCTGAAACTCTAAGGGTCTATG3250.2619446772841576No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC3020.24340705396866336No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC3010.24260107034625059No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT2900.23373525049970983No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTGTGCCATACCAAGAATAAG2860.23051131601005864No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC2820.2272873815204075No Hit
CATAGAGGGCTATCCTTGCTCAGATCACATTTATCGGGAGCCACAGATCT2580.2079437745825005No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT2460.198271971113547No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT2430.1958540202463086No Hit
CATAGAGGAAAGAACAACTGCGGACGCGTCTCCTTAAGAGCCGTAACACT2360.19021213488941904No Hit
CATAGAGAAACTTTTAATAATGAAATACTGGGGGCACATAGAGGCAAGGG2350.18940615126700625No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA2310.18618221677735508No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACGTGGTGTTTGGG2110.17006254432909923No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG2080.16764459346186086No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG2060.16603262621703527No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGGCTGAAACTCTAAGGGTCT2040.1644206589722097No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG2010.1620027081049713No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTACCAAAAGCACAAGGG1990.16039074086014574No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1990.16039074086014574No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA1930.15555483912566898No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGCAAGGGTAC1920.15474885550325618No Hit
CATAGATCAAGGTGTGAGCATGGTCCATTTCTGGTGAGGGCTCTCTTCCA1890.15233090463601778No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTGCCATACCAAGAATAAGAA1890.15233090463601778No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTTTCAAATACCACTTCCTCTGTG1890.15233090463601778No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC1860.14991295376877942No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTCAAGAGGCAAGGGTACTATTTT1780.1434650847894771No Hit
CATAGAAAGGGACAAGGGCTCACTCTTCTGCTGCTCACTCTTTGGGTTCT1600.1289573795860468No Hit
CATAGAGAAGCTTTGAGATTTGTGTCTGTTCTATGTGTAGAACCATGTCG1400.11283770713779095No Hit
CATAGATCCAGCTTCATCCATGTCCCAGGAAAGTTGGAACCTATCAGTGT1370.11041975627055257No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT1290.10397188729125025No Hit
CATAGAACAATCAGGCACCCACCATGGTGGGAGTATACTGATAGCTCTAT1260.10155393642401188No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)