FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806689

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806689
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences137484
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC110208.015478164731896No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC84536.1483518082104105No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA84116.117802798871141No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA77655.647929940938582No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT49783.6207849640685463No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA44643.2469232783451165No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA41423.0127142067440578No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA41313.0047132757266297No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA39212.8519682290302875No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT35862.6083035116813593No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT33702.451194320793692No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG22751.6547380058770476No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC21411.5572721189374763No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA19931.4496232288848157No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT18201.323790404701638No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC14211.0335748159785865No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC13931.0132088097524075No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT13060.9499287189782084No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC13030.9477466468825463No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA11960.8699194088039335No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT10940.7957289575514241No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG10250.7455412993511972No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT10230.7440865846207558No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA10180.7404497977946525No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA9510.6917168543248668No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA9310.6771697070204533No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG8840.6429839108550813No Hit
CATAGAGCATCCTCGTAATAGCAAACATTCCAACTCTATAGATTATGCTC8480.6167990457071368No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTGGTGGTGCTGGAACTAGTTCTAT8220.5978877542113992No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT7910.5753396758895581No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA7610.5535189549329377No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA7400.5382444502633034No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG6810.4953303657152832No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA6420.4669634284716767No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA6330.4604172121846906No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG6110.4444153501498356No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG6030.43859649122807015No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA5850.42550405865409796No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA5810.4225946291932152No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG5790.4211399144627739No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG5720.4160484129062291No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA5700.41459369817578773No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG5620.4087748392540223No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT5500.40004655087137414No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT5350.38913619039306396No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA5110.3716796136277676No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA5020.36513339734078143No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC4930.3585871810537954No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT4780.34767682057548516No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA4560.33167495854063017No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA4400.32003724069709927No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC4290.31203630967967183No Hit
CATAGAGTCATTCCAAACTGTGCACTTGAGTCACTCAAATATAGACCTCA4120.29967123447092026No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG4030.2931250181839341No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA4030.2931250181839341No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGGCAAGTGTATGGTCAGTT3840.2793052282447412No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC3820.27785051351429985No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT3690.268394867766431No Hit
CATAGATGCACCAGAAGCCACCTACCGTACATCGGCCGCACTGAAATTGT3570.25966657938378285No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC3530.2567571499229001No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA3470.252393005731576No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGAACAAGGGCATGGTCAAGTGT3460.25166564836635535No Hit
CATAGATGCACCAGAAGCCACCTACCTTCCCCCTTTACCTACCTTCTCAG3280.23857321579238314No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT3260.23711850106194177No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG3110.22620814058363156No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA3080.2240260684879695No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACCCGTAATCCCTCCCTTTTCTA3060.22257135375752815No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGCCTTCTCTGATACCATCCC2890.2102062785487766No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA2740.19929591807046637No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG2360.17165633819208054No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2320.16874690873119783No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT2300.16729219400075646No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA2290.16656483663553578No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC2230.16220069244421167No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG2220.161473335078991No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC2190.15929126298332896No Hit
CATAGATCATGGGACTTCAGCATGGCATAGATCTACTCCAGTCTCGGCAA2070.1505629746006808No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT2010.14619883040935672No Hit
CATAGAAAAGTCACCATGCAGCCCTGAGGTTCTTCAACACAGCTATTCTA1950.14183468621803266No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACCCGTAATCCCTCCCTTTTC1930.1403799714875913No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGACAATGGGCACACTTAACACC1800.13092432573972246No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA1800.13092432573972246No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT1790.13019696837450176No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTGTGATTGTCCTGGTCTATGA1760.12801489627883972No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG1730.12583282418317768No Hit
CATAGATCATGAATGACTCCCACTCTGGGTCCATTTTTGGTTCTCTTCTA1620.1178318931657502No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGATGACTTATGGAATCTG1590.11564982107008816No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT1580.11492246370486747No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACTTAGGAGTTCTGGCCC1520.11055831951354339No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGGCAAGTGTATGGTCAGT1500.10910360478310202No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT1480.10764889005266066No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGAAGGGCAAGTGTATGGTCA1470.10692153268743998No Hit
CATAGATTTGGCACTCACATACACGCCCAAGTATATGACACATTACACCA1460.10619417532221932No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTACAATGGGCACACTTAA1450.10546681795699864No Hit
CATAGAGCACCCAACTATCCTTCAGCACACTGACGACATGGTTCTACACA1440.10473946059177797No Hit
CATAGACAGTCCTGCCGTGTACATGTTTGGGGGAAGAGAAACAGAATCTA1410.10255738849611591No Hit
CATAGACCATGTAATACCATCGTGAGCAGACAATGGGCACACTTAACACC1380.10037531640045387No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT1380.10037531640045387No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)