FastQCFastQC Report
Tue 7 May 2024
EGAF00005806693

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806693
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49759
Total Bases7.4 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1715734.48019453767158No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC15183.0507043951847908No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT10782.1664422516529673No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA9041.8167567676199279No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA8421.6921561928495348No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA7261.4590325368275086No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA7251.4570228501376636No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA6351.2761510480516087No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA6261.2580638678430032No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC4800.9646496111256255No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT3920.7877971824192609No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT2560.5144797926003336No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA2140.4300729516268414No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA2050.41198577141823595No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT2040.40997608472839087No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1800.36174360417210955No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA1750.3516951707228843No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT1420.28537550995799754No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCATCTCTA1290.25924958299001183No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA1190.23915271609156133No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA1190.23915271609156133No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1170.2351333427118712No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCCATCTCTA1160.23312365602202617No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT1130.22709459595249099No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCGTCTCTA1010.20297835567435035No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG990.19895898229466027No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCTGTCTCTA970.19493960891497017No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG970.19493960891497017No Hit
CATAGATCATGGGACTTCAGCATGGCGAAACCCCATCTCTACTAAAAATA950.19092023553528006No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCTGTCTCTA920.18489117546574488No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG920.18489117546574488No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCGTCTCTA890.17886211539620975No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGATGAAACCCCATCTCTA890.17886211539620975No Hit
CATAGATGCCCTTTTTGTGTACTTCCAACACTGTACCATGTTTTCATCCT890.17886211539620975No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG890.17886211539620975No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCGTCTCTA870.17484274201651964No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGATGGTGAAACCCTGTCTCTA860.17283305532667456No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCGTCTCTA860.17283305532667456No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCTGTCTCTA850.17082336863682954No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCCATCTCTA840.16881368194698446No Hit
CATAGATCATGGGACTTCAGCATGGCACTGGTACCAAAACAGAGATATAG780.15675556180791414No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGAGTCACTTCTTTTGATAATTC770.15474587511806911No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG770.15474587511806911No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC760.15273618842822403No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT740.14871681504853393No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTAAAACCCCGTCTCTA720.14469744166884382No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA710.14268775497899877No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGCTTCCTTC710.14268775497899877No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCCGTCTCTA700.14067806828915372No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA700.14067806828915372No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCCATCTCTA680.1366586949094636No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG680.1366586949094636No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG680.1366586949094636No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG670.13464900821961856No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCATCTCTA670.13464900821961856No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG660.1326393215297735No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA650.13062963483992845No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGATGGTGAAACCCCATCTCTA630.12661026146023835No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTAAAACCCCATCTCTA630.12661026146023835No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG630.12661026146023835No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAAATATACAATCA620.1246005747703933No Hit
CATAGATCCTCTCATTGTCCAGTTTGGTCTCATAGAATCCTATCCCCAGA610.12259088808054826No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG610.12259088808054826No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGATGGTGAAACCCCGTCTCTA610.12259088808054826No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG590.11857151470085815No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA590.11857151470085815No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG570.11455214132116805No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGAGAAACCCCATCTCTA560.11254245463132298No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG560.11254245463132298No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTATGCAGATTTGGACCTGCG530.10651339456178782No Hit
CATAGATCATGGGACTTCAGCATGGCCAACGTGGTGAAACCCCATCTCTA530.10651339456178782No Hit
CATAGAGAGATTTTGGGCTGAGACGAGTACAGCATGGTACTGGTACCAAA530.10651339456178782No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGGAGACAGCCGCTCACCTC530.10651339456178782No Hit
CATAGAGCAACAGGGACTCTCATTCACAAAGTCACGAAAGTGGGTCTATG520.10450370787194277No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT510.10249402118209772No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCCGTCTCTA510.10249402118209772No Hit
CATAGATCATGGGACTTCAGCATGGCATCCTTTCCCTCACTCTCTCCATC500.10048433449225266No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)