FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806701

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806701
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74647
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG885911.867858051897597No Hit
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA842011.279756721636502No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG55357.414899460125659No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG50116.712928851795786No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG35104.702131364957735No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA31904.273447023992927No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC21052.8199391804091256No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG19762.6471258054576876No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT19602.625691588409447No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT17422.3336503811271716No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA16602.22380001875494No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA13501.8085120634452823No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA12261.6423968813214194No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC9851.3195439870322987No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA7961.0663522981499591No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG7390.9899928999156028No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT6730.9015767545916111No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG5160.6912534998057525No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA4990.668479644191997No Hit
CATAGACCAGCAGACACTCCCATCATACACTGCCCTCTCTGCTGTTCCTT4360.5840824145645505No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA3740.501024823502619No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT3640.48762843784746873No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA3580.4795906064543786No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA3320.444760003750988No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT3140.42064650957171756No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC3120.4179672324406875No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG2900.38849518399935695No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA2860.3831366297372969No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG2800.37509879834420673No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC2700.3617024126890565No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTTTGCAGATTTGGACCTGCGAG2660.3563438584269964No Hit
CATAGACCGCTTCCCAATTTTTGTAACACACTGACGCTATACCACACTAC2540.3402681956408161No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC2370.3174943400270607No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGTTCTACA2240.3000790386753654No Hit
CATAGATCAAGGAAAACACCAGCCCAGTGTCTGTTTCCCCACTCAAATAC2170.29070156871676023No Hit
CATAGATCACGTAGAAACTGGAGAGGCCAGTGCAGTGGGGAGGCAGGCTG2150.2880222915857302No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT2110.28266373732367006No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTCAAGGGGTAAGGCGTACT2100.28132409875815506No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA2080.278644821627125No Hit
CATAGACTCATTGCACTTTCCACAACTGTACATAGAAATGATGCTGAAGT1970.2639087974064597No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA1940.25988988170991467No Hit
CATAGACCAGCAGACACTCCCATCATTTGCCATCTATGAGACCAAGAGAT1840.24649349605476442No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT1800.24113494179270434No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG1740.23309711039961417No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT1680.22505927900652403No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC1660.222380001875494No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG1630.2183610861789489No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGACGATCATTGTTCACTGC1560.20898361622034375No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT1390.18620976060658836No Hit
CATAGACATTTAATCCTCACAATGACCCATGCTGTCATTGTCGCTGTCCC1360.18219084491004328No Hit
CATAGATCCACGTGAGAATAAAGCATACACACTGACGACATGGTTCTACA1360.18219084491004328No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG1270.17013409782040806No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT1240.16611518212386298No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGAAAAATTTCTATGAGA1230.16477554355834795No Hit
CATAGAGAAGACTCCCTCAACCCACCTTCCCCACACCCTCTTCTTCTATG1210.16209626642731792No Hit
CATAGACATTTAATCCTCACAATGACCCATGGGTGGAAGGGTAAGAGAGG1150.15405843503422775No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGCTATACCACACTACA1150.15405843503422775No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGGGGTTACCACCTTGCAAGA1130.1513791579031977No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGACATGCCAGGAATCAATGT1120.1500395193376827No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGGTCATTCTG1110.14869988077216767No Hit
CATAGAGCTTGGGTGCGAACATCAACACACTGGCTCAGGTATGTCTTTAT1080.1446809650756226No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCGTACCTTCCCCACACCCTCT1070.1433413265101076No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAATGGTGGAAGGGTAAGAGAGGGT1050.14066204937907753No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG1010.13530349511701742No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT1010.13530349511701742No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT970.12994494085495734No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC940.12592602515841225No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG930.12458638659289725No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGTTCTACACA910.12190710946186718No Hit
CATAGACTCATTGCACTTTCCACAACTGTTCTTCCTTTTCTGCCTTCATC880.11788819376532213No Hit
CATAGAAATGATGCTGAAGGGCCTGGAAATGATGCTGAAGTGATGGGCTA830.111190000937747No Hit
CATAGACCAACATTTCTTCTCCCAGGGTATAAAGCTGGACCCTCTCTGGG810.10851072380671696No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGGACCTAAGGCTGGTCTCAAA810.10851072380671696No Hit
CATAGACCAGCAGACACTCCCATCATTCAGACTCTATGGGCCCCAGTGTG810.10851072380671696No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTGGTGGAAGGGTAAGAGAG780.10449180811017188No Hit
CATAGACCAACATTTCTTCTCCCAGGGTTCACTACAATGTTCTGGCATGT780.10449180811017188No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT770.10315216954465685No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)