FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806702

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806702
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74647
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA918312.301900947124466No Hit
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT845611.327983709995044No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG55047.373370664594692No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG49766.666041502002759No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG34744.653904376599193No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC31634.237276782724021No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG21272.8494112288504563No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG19682.636408696933567No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT19002.5453132744785454No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG17442.336329658258202No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT16822.2532720671962703No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA13641.8272670033624927No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA12321.6504347127145096No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC9921.3289214569909038No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT7961.0663522981499591No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA7901.0583144667568691No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG7460.9993703698742079No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT6870.9203316945088216No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG6650.8908596460674909No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC5080.6805363912816322No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT5020.672498559888542No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTATGATGGGAGTGTCTGCTGGT4320.5787238603024903No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT3760.503704100633649No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT3660.4903077149784988No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA3640.48762843784746873No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACAGTTGTGGAAAGTG3250.43538253379238284No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT3150.42198614813723256No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT3130.4193068710062025No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG2980.3992122925234771No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCTGGGAGAAGAAATGTT2920.391174461130387No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG2740.36706096695111656No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC2630.35232494273045134No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTTACAAAAATTGGGAA2520.33758891850978606No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC2330.3121357857650006No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCTAGGATTTGAGCTCATG2130.2853430144547001No Hit
CATAGACCAGTACGCCTTACCCCTTGACACTGTCATTGTGGGTTTTAACT2090.27998446019264No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTGGGCTGGTGTTTTCCTT2050.27462590593057995No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTACAGTTGTGGAA2030.2719466287995499No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT1960.2625691588409447No Hit
CATAGATGGCAAATGGTGGGATCTCTTGGTCTCATAGATGGCAAATGATG1820.24381421892373437No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT1770.23711602609615923No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG1720.23041783326858412No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG1710.22907819470306912No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG1630.2183610861789489No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACGAATGAGGAAACAG1520.20362506195828367No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG1400.18754939917210336No Hit
CATAGATGGGACAGCGACAATGACAGCATGGGTCATTGTGAGGATTAAAT1340.17951156777901323No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG1310.17549265208246814No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT1250.167454820689378No Hit
CATAGACCCTCTCTTACCCTTCCACCCATGGGTCATTGTGAGGATTAAAT1160.15539807359974278No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTGGGTTGAGGGAGTCTTCTCTATG1150.15405843503422775No Hit
CATAGAACATTGATTCCTGGCATGTCCCATTGTAGATTTCTTTCACCTCC1150.15405843503422775No Hit
CATAGAGCAGCTTGAATTCTCCTCAGAATGACCCATGTCGTCAGTGTAGC1120.1500395193376827No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGATGGGAGTGTCTGC1120.1500395193376827No Hit
CATAGACCCTCTCTTACCCTTCCACCATTCACTCTCCCACCATTCAGACT1090.14602060364113761No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAGGAAATGATTTCCCTTGAA1080.1446809650756226No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTGTTGATGTTCGCACCC1060.14200168794459256No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG1060.14200168794459256No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTACGGTAGCAGGCCCTTCAGCATC1050.14066204937907753No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA1030.13798277224804747No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC990.1326242179859874No Hit
CATAGATCTCACCGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT980.13128457942047236No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG980.13128457942047236No Hit
CATAGACCCTCTCTTACCCTTCCACCATTCAGACTCTATGTGTAGAACCA930.12458638659289725No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAGTTGTGGAAAGTGCAATGAGTC910.12190710946186718No Hit
CATAGAGCAACCCCAGCAGTTTGAGAGGCCGAAGAGGGCCAATTGCTTGA870.11654855519980709No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCCAGGCCCTTCAGCATCA840.11252963950326202No Hit
CATAGAAGTATTCACACTGGGGCCCATAGAGTCTGAATGATGGGAGTGTC820.10985036237223197No Hit
CATAGATGGGACAGCGACAATGACAGTACGGTAGCAGGCCCTTCAGCATC820.10985036237223197No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGGTGCGATGGCTTTCTGACT790.10583144667568689No Hit
CATAGACCCTCTCTTACCCTTCCACCACACTGACGAATGAGGAAACAGGC780.10449180811017188No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGCATCTGCACATGCCAGAACATTGT770.10315216954465685No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGCAGGCCCTTCAGC770.10315216954465685No Hit
CATAGATCTAGCCCATCACTTCAGCACAGGCCCTTCAGCATCATTTCTAT760.10181253097914184No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)