FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806703

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806703
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41213
Sequences flagged as poor quality0
Sequence length150
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAAAACAGAGTCACAGTCCCCAGTCAATTCCCAGACATAAGCCAGT471211.433285613762648No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT18594.5107126392157815No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGAGTCACTTCTTTTGATAATTC18074.384538859097858No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC16293.95263630407881No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT14853.603231989906098No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA14563.532865843301871No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG13953.3848542935481523No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA13003.154344502948099No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG12803.1058161259796666No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT12192.957804576225948No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA11672.831630796108024No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC11632.8219251207143374No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA10352.5113435081163713No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG10102.450683036905831No Hit
CATAGACCAATAAAAGTTGATGGGATGAAGTAAGAAACATTTTAGAGCAC9842.3875961468468687No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT8782.1303957489141774No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT6711.6281270472909033No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC5371.302986921602407No Hit
CATAGAGATGTTTGATAAGCAGGGTGACTAGAGTTAATGGTAATTTATTG4771.1574017906971101No Hit
CATAGATGCCCTTTTTGTGTACTTCCATAGAAATCTGACATTTCTCATAA4571.1088734137286778No Hit
CATAGATTCTGAAGAAATCAGATAGAGAGAAACACACTGTACCATGTTTT4371.0603450367602456No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG4080.9899788901560187No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT3170.7691747749496518No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA2910.7060878848906899No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA2520.6114575498022469No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT2380.5774876859243443No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTTGGTAGAGATGGGG2280.5532234974401281No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATATGTCTTTATCAGCAGCATT2160.5241064712590687No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAC1970.47800451313905806No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATCCCCA1910.4634460000485284No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACTCCGTCTCTA1740.42219687962536095No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG1710.4149176230800961No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA1570.3809477592021935No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC1430.3469778953242909No Hit
CATAGAGAGATTTTGGGCTGAGACGAGTACAGCATGGTACTGGTACCAAA1200.29117026181059374No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT1080.26205323562953436No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA1060.25720039793269117No Hit
CATAGAACTTCACAAGGGCTTTAGGGTATTTTTTAAGGCAATTGAAGAGT1060.25720039793269117No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC1030.2499211413874263No Hit
CATAGAAAACAGAGTCACAGTCCCCAGAAATGTTAGCATGTCTATGAGAC970.2353626282968966No Hit
CATAGAACACAGAGTCACAGTCCCCAGTCAATTCCCAGACATAAGCCAGT940.22808337175163176No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG870.21109843981268048No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAATGGGCAAGCAA840.2038191832674156No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA810.19653992672215076No Hit
CATAGACAGAAACCACCCAGACAACCCACAGAGTAGTAAGAAGTAATAAA790.19168708902530754No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG780.18926067017688594No Hit
CATAGAGCTGGCTTCCTAACTTCCAATGGTTCTACACATAGAGCTGCCTT780.18926067017688594No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA750.18198141363162107No Hit
CATAGATATCCATCATGTGGAAGCTGGAGAGTCACTTCTTTTGATAATTC690.1674229005410914No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA690.1674229005410914No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT670.1625700628442482No Hit
CATAGATGCCCTTTTTGTGTACTTCCACATAGATGCCCTTTTTGTGTGCT670.1625700628442482No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA670.1625700628442482No Hit
CATAGAGAGATTTTGGGCTGAGACGAGCAGGTCAGAAGTTCAAGACCAGC670.1625700628442482No Hit
CATAGACACCATGCCTGGCTAATTTTTTAATTTTGTGTAGAGACTGGGTC670.1625700628442482No Hit
CATAGATTGGAACTTTGCCAGCCTTACCAACATGGTGAAACTCCGTCTTT660.16014364399582656No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTCTGTTATT630.15286438745056172No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGAATCCTATCCCCAGAAAT630.15286438745056172No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA610.14801154975371847No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCTTGTGCTGGCTTGACTTTT610.14801154975371847No Hit
CATAGAGCTGGCTTCCTAACTTCCAATGGGCAAGCAATGACAGTCTATGA590.14315871205687525No Hit
CATAGAGCCAAGGAAAGTTGAATGGATGAAGTAAGAAACATTTTAGAGCA580.14073229320845365No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA580.14073229320845365No Hit
CATAGAGCTGGCTTCCTAACTTCCAACATAGAGCTGCCTTCCTAACCATG550.1334530366631888No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCACCT540.13102661781476718No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT510.12374736126950234No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA500.12132094242108074No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACGACATGGTTCTACAC490.1188945235726591No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACA480.1164681047242375No Hit
CATAGAGATGTTTGATAAGCAGGGTGACTAGAGTTAATGGTGATTTATTG470.11404168587581588No Hit
CATAGAGCAACAGGGACTCTCATTCAATAACAATGGGCAAGCAATGACAG460.11161526702739427No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTATCCCCAGAAATGTTA430.10433601048212944No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)