FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806708

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806708
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102795
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2242721.817209008220246No Hit
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT97449.479060265577118No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG62486.078116639914392No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG50794.940901794834379No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG46504.52356632131913No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC38343.729753392674741No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG25412.4719101123595504No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG24142.348363247239652No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG21742.11488885646189No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT19861.932000583685977No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT16661.620701395982295No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA14371.3979279147818473No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC13821.344423366895277No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT12681.2335230312758403No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA12051.172236003696678No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA11321.1012208765017752No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT11041.0739821975777033No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT6180.601196556252736No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC6150.5982781263680139No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT6010.584658786905978No Hit
CATAGATCTAGCCCATCACTTCAGCACACTGTCAGACCCAGGCTACACAT5800.5642297777129238No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT4900.4766768811712632No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT4850.47181283136339314No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCATGTCGTCAGTGTACA4810.46792159151709717No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT4500.437764482708303No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTGGGTTGAGGGAGTCTTCTCTATG4470.43484605282358096No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCAGCCCGTTCTCTCTGTTGTG4430.4309548129772849No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG3800.3696677853981225No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTAGCCCGTTCTCTCTGT3790.36869497543654844No Hit
CATAGACCAGTACGCCTTACCCCTTGCATAGACCATGGAGAGAATAATCC3780.36772216547497444No Hit
CATAGATCTAGCCCATCACTTCAGCATCACAGTTGTGGAAAGTGCAATGA3370.3278369570504402No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT3320.32297290724257016No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG3090.300598278126368No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG3020.29378860839535No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC2820.27433240916386986No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC2770.26946835935599983No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCATGATGG2750.26752273943285176No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA2750.26752273943285176No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC2560.24903935016294568No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT2350.22861034096989152No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACCTCCTCTATGTGT2320.2256919110851695No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGC2290.2227734812004475No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG2180.21207257162313342No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTTATAGAAAACAAGGAGAACATCT2080.20234447200739336No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG2010.19553480227637532No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAAGAAATGTTGGTCTATGTG1900.18483389269906125No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG1710.1663505034291551No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG1640.15954083369813707No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG1520.147867114159249No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGGCAGGCCC1430.13911182450508291No Hit
CATAGATGGCAAATGGTGGGATCTCTGTTGTGTCTATGTGTAGAACCATG1400.1361933946203609No Hit
CATAGACCCTCTCTTACCCTTCCACCATTCAGACTCTATGTGTAGAACCA1370.1332749647356389No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1370.1332749647356389No Hit
CATAGATGGCAAATGGTGGGATCTCTCTCATAGATGGCAAAATGATGGGA1360.13230215477406487No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA1350.13132934481249087No Hit
CATAGATCTCACCGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1350.13132934481249087No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTACGAATGAGGAAACA1300.12646529500462084No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1300.12646529500462084No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGCAGGCCCT1190.11576438542730677No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTACCCTGGGAGAAGAAATGTTG1170.11381876550415876No Hit
CATAGATTCCTCCAAAGACTGCAGGGGAGACTTGGTCTCATAGATTCCTC1140.11090033561943675No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGCAGGCCCTTCAGC1120.10895471569628873No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG1120.10895471569628873No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC1080.1050634758499927No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAGCAGGCC1070.10409066588841868No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1040.10117223600369668No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTGCAGGCCCTTCAGCAT1030.10019942604212266No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)