FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806711

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806711
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18759
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG870546.40439255823871No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA5683.027879950956874No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG3842.047017431632816No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC3621.9297403912788527No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC3281.748494056186364No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG3221.7165094088171011No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG2861.5246015246015245No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG2251.1994242763473533No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC2011.0714856868703022No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1740.9275547737086198No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA1740.9275547737086198No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT1650.8795778026547258No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA1500.7996161842315689No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG1380.7356468894930434No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT1380.7356468894930434No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA1350.7196545658084119No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT1350.7196545658084119No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC1120.5970467508929047No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA980.5224159070312917No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT980.5224159070312917No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA970.5170851324697479No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG870.4637773868543099No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT770.41046964123887203No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG700.37315421930806547No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG670.3571618956234341No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA650.3465003465003465No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT590.31451569913108374No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA540.28786182632336477No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG510.2718695026387334No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT510.2718695026387334No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG510.2718695026387334No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG500.2665387280771896No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG490.26120795351564585No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA440.23455408070792685No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG440.23455408070792685No Hit
CATAGACGGATTATTCTCTCCATGGTCTGAGGAGAATTCAAGCTGCTCTA420.22389253158483927No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG400.21323098246175168No Hit
CATAGATCAAGGAAAACACCAGCCCAACACTGACGCTATACCACACTACA360.19190788421557653No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG350.18657710965403274No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG340.18124633509248894No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT330.17591556053094515No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG320.17058478596940135No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA310.16525401140785756No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG310.16525401140785756No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT310.16525401140785756No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG310.16525401140785756No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGCGACATGGTTCTACACAT300.15992323684631377No Hit
CATAGATCATGGGACTTCAGCATGGCCTGACGACATGGTTCTACACATAG300.15992323684631377No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT300.15992323684631377No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG280.14926168772322618No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG270.14393091316168238No Hit
CATAGACGTGACTAAAAGCATGTTGGTCTACCAGTTATTAGTTGAATGAG250.1332693640385948No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGCTATACCACACTACA240.127938589477051No Hit
CATAGATCATGGGACTTCAGCATGGCTCCAGTTAAAAGTGCCAGACCCCA220.11727704035396343No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA220.11727704035396343No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTCACAT220.11727704035396343No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGACGATCATTGTTCACT210.11194626579241963No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG210.11194626579241963No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG200.10661549123087584No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGTGGAGACAGCCGCTCACC200.10661549123087584No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGAGAACATCTGTGGAGACAGC190.10128471666933204No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTCCCTGCAGTCTTTGGAGG190.10128471666933204No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCATTGTCGCTGTCCCATCTA190.10128471666933204No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)