FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806712

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806712
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18759
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA855345.59411482488406No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA5542.953249107095261No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG3751.999040460578922No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC3611.924409616717309No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG3251.7325017325017324No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG3231.721840183378645No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG2781.4819553281091742No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG2141.1407857561703716No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC1981.0554933631856709No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA1740.9275547737086198No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1690.9009009009009009No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT1620.8635854789700944No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA1540.8209392824777441No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG1530.8156085079162002No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT1370.7303161149314995No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG1370.7303161149314995No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT1330.7089930166853243No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT1320.7036622421237806No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC1140.6077083000159923No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT950.5064235833466603No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT950.5064235833466603No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT950.5064235833466603No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG840.44778506316967853No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT770.41046964123887203No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT600.31984647369262753No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG540.28786182632336477No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA530.282531051761821No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG510.2718695026387334No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT490.26120795351564585No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA450.23988485526947068No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT440.23455408070792685No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA420.22389253158483927No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACCATGGAGAGAATAATCCGTCTA420.22389253158483927No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA400.21323098246175168No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA400.21323098246175168No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA390.2079002079002079No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG380.2025694333386641No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA380.2025694333386641No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA360.19190788421557653No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA330.17591556053094515No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTTGGGCTGGTGTTTTCCT330.17591556053094515No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT330.17591556053094515No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT330.17591556053094515No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG320.17058478596940135No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG320.17058478596940135No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG320.17058478596940135No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT310.16525401140785756No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA260.1386001386001386No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCACGCAGAGCCTTCAGGTCA260.1386001386001386No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCAACATGCTTTTAGTCAC240.127938589477051No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA220.11727704035396343No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT210.11194626579241963No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTTA210.11194626579241963No Hit
CATAGATTCCTCCAAAGACTGCAGGGACACTGACGAATGAGGAAACAGGC200.10661549123087584No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTAAAGGCTGGGGTCTT200.10661549123087584No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGAGAACCATGT200.10661549123087584No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTTGTTACAAAAATTGGG200.10661549123087584No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA190.10128471666933204No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGTCTTTGTCATTCTCTCCCAGGAC190.10128471666933204No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGTGCAGAGCCTTCAGGTCA190.10128471666933204No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA190.10128471666933204No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)