FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806715

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806715
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30958
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1430946.22068609083274No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA14114.557787970799147No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT9553.0848246010724205No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC8002.5841462626784675No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC4821.5569481232637767No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG4571.4761935525550745No Hit
CATAGACTTGATGCCCAGGAAACCTCATGGTGTTATTTAAAGACTTGAGA3581.1564054525486143No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC2810.9076813747658117No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA2640.8527682666838944No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT2380.7687835131468441No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT2350.7590929646617999No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG2230.7203307707216228No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA2160.6977194909231863No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA2070.6686478454680534No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT1950.6298856515278765No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG1840.5943536404160475No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG1370.4425350474836876No Hit
CATAGATTCTCCCTTGTGCTTTTGGTTCCCTTGTGCTCATACAGAATTAG1230.3973124878868144No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT1110.3585502939466374No Hit
CATAGACAGCTGACCAGAAAATGTTTCAACACTGACGACATGGTGGGTGC1100.3553201111182893No Hit
CATAGAGGGTGTTTTTCGGTGTCACATATACACCGTGGAATACTATGCAG1090.35208992828994123No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT1080.34885974546159315No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC1060.34239937980489693No Hit
CATAGACAGCTCACAGACTGCATACTACACTGGGGACATGGATGAAGCTG1000.32301828283480843No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC980.31655791717811227No Hit
CATAGAACAAGGCCAGAATTACCCTGCATAGAGGCTGCTTTTCTCTTCTT980.31655791717811227No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT960.3100975515214161No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC960.3100975515214161No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG920.2971768202080238No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG880.28425608889463144No Hit
CATAGAATGCAGGAGAATATACACAGGTTATAGAGAATTAGCGGAGAGTG820.26487499192454295No Hit
CATAGACAGGAGGAGGAAGAAGAGGATAAAACAGGATTAGAGTTAAAAAG820.26487499192454295No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG740.23903352929775826No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG700.22611279798436593No Hit
CATAGAACAATGTAATAAGCATCGGAGGACCATGCTCACACCTTGATCTA690.22288261515601782No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC670.21642224949932165No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG640.2067317010142774No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTGGGGCCAGCAGAATCAGGGTTGG620.20027133535758124No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC590.190580786872537No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT580.1873506040441889No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG570.18412042121584082No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC560.18089023838749274No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA560.18089023838749274No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG550.17766005555914466No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG510.1647393242457523No Hit
CATAGACAGGAGGAGGAAGAAGAGGACCTTAGAGAGTTGCCGAGGGAACT490.15827895858905613No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG490.15827895858905613No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG490.15827895858905613No Hit
CATAGAACAATGTAATAAGCATCGGAGGACACTGACGACATGGTTCTACA450.1453582272756638No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG450.1453582272756638No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGATCTGCG440.14212804444731572No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCATGGTTCTACACATAGAACCCAA440.14212804444731572No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACATATACACCATTCAATACT440.14212804444731572No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG430.1388978616189676No Hit
CATAGACTTGATGCCCAGGAAACCTCTAAAAAGATGCTCTTCCTCATTCG430.1388978616189676No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGTTCTACACATAGAACCCAAAGAG410.13243749596227147No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACACTGACGACATGGTTCTACACA400.1292073131339234No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACACTGACGACATGGTTCTA390.1259771303055753No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTGGTTCTACACATAGAACCCAAAG390.1259771303055753No Hit
CATAGACTTGATGCCCAGGAAACCTCATGGTGTTACTTAAAGACTTGAGA380.12274694747722723No Hit
CATAGAACCCAAAGAGTGAGCCCTTGTCCCTTTCTATGAGACCAAGTCTC380.12274694747722723No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACGACATGGTTCTACACATAGAAC380.12274694747722723No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA370.11951676464887913No Hit
CATAGACAGGAGGAGGAAGAAGAGGATTGCTTGAACCCAGGAGACTGAGG360.11628658182053105No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT360.11628658182053105No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT360.11628658182053105No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACATATACACCATGGAATACT350.11305639899218296No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGACCTATGAGA340.10982621616383488No Hit
CATAGAGAAGAGAAGGCGACAATGGCTTGAACCCGGGAGGAGGTTGCAGC340.10982621616383488No Hit
CATAGAATGCAGGAGAATATACACAGGTTACACTGACGACATGGTTCTAC330.1065960333354868No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTTGACCTGCG330.1065960333354868No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT310.10013566767879062No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGACATGGTTCTACACATAGAACCC310.10013566767879062No Hit
CATAGAACCCAAAGAGTGAGCAGCAGACATGGTTCTACACATAGAACCCA310.10013566767879062No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)