FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806718

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806718
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11067
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA470242.48667208819011No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA4664.2107165446823895No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT3282.963766151621939No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG3192.8824432999006055No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG2722.457757296466974No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1491.3463449896087467No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA1131.021053582723412No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG1000.9035872413481522No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCTTGGTCTCATAGAGGCAA890.8041926447998554No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT860.7770850275594109No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT570.5150447275684468No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC540.4879371103280022No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA530.4789012379145206No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG530.4789012379145206No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG490.4427577482605946No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGGTAATTCTGGCCTTGT480.43372187584711297No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG420.3795066413662239No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT400.36143489653926086No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA390.35239902412577934No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG380.3433631517122978No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT380.3433631517122978No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGGTAATTCTGGCCTTGTTCTATG380.3433631517122978No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGTGCCATACCAAGA360.3252914068853348No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT360.3252914068853348No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG350.31625553447185323No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG340.30721966205837176No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA330.29818378964489023No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTGTAGAACACTATGGCTTAATG310.2801120448179272No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC310.2801120448179272No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGCAAAAGAGAAACATTTAT310.2801120448179272No Hit
CATAGAGCCATCATCATTTCTCACCCAGAAGCTTTGAGATTTGTGTCTGT300.27107617240444565No Hit
CATAGATTTCTGTACCTCACTGCCGAACACTGACACTATGGCTTAATGTT290.2620402999909641No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA280.2530044275774826No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA270.2439685551640011No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG260.23493268275051957No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA250.22589681033703804No Hit
CATAGAGAAACTTTTAATAATGAAATACTGGGGGCATAGAGAAGCTTTGA250.22589681033703804No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC250.22589681033703804No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA250.22589681033703804No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG220.1987891930965935No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGTGCCTTCAGGTCA210.18975332068311196No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCTTTCAGGTCA210.18975332068311196No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT200.18071744826963043No Hit
CATAGATTTCTGTACCTCACTGCCGAGGTTTCCTGGGCATCAAGTCTATG200.18071744826963043No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCTAGAGCAGGAAAGTTGGAA200.18071744826963043No Hit
CATAGATCAAGGTGTGAGCATGGTCCAGGAGGAAGCCTCCGTGCGAACAG200.18071744826963043No Hit
CATAGATAGCAGCAATCTCAGGCCTCCTTGGTCTCATAGAGGCAAGGGTA180.1626457034426674No Hit
CATAGATCCAGCTTCATCCATGTCCCTGCAAAGCACATAAACTCATCCTT180.1626457034426674No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACTGCT180.1626457034426674No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTACTATGGCTTAATGTT170.15360983102918588No Hit
CATAGACTCACTCTGTCACCCAAGCTACACTGAAACATTTTCTGGTCAGC170.15360983102918588No Hit
CATAGGGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA170.15360983102918588No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCATGATCTATGTGTAGA160.14457395861570435No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG160.14457395861570435No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC160.14457395861570435No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA160.14457395861570435No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTCTATGTGTAGAACCATGTCGTC160.14457395861570435No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT160.14457395861570435No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA150.13553808620222282No Hit
CATAGAGGTGAGCGGCTGTCACCACAAGTCCGCGCAGAGCCTTCAGGTCA150.13553808620222282No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTTAGGTCA150.13553808620222282No Hit
CATAGAGGTGAGCGGCTGTCCCCACAAGTCCGCGCAGAGCCTTCAGGTCA150.13553808620222282No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTTGTGACACCGAAAA150.13553808620222282No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG140.1265022137887413No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA140.1265022137887413No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA140.1265022137887413No Hit
CATAGAACCAACCCTGATTCTGCTGGAGGCTGAAACTCTAAGGGTCTATG140.1265022137887413No Hit
GATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA140.1265022137887413No Hit
TATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA130.11746634137525978No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCCGATGCTTATTACATTGTTCTA130.11746634137525978No Hit
CATAGAGGTGAGCGGCTGCCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA130.11746634137525978No Hit
CATGGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA130.11746634137525978No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA130.11746634137525978No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATACCAA130.11746634137525978No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA130.11746634137525978No Hit
CATAGAGATCTTCTCGGCTTAGCGGCGAGTGCCATACCAAGAATAAGAAC130.11746634137525978No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGACTTGGTCTCATAGAACTG130.11746634137525978No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT130.11746634137525978No Hit
CATAGATAGCAGCAATCTCAGGCCTCTCTCTCTCTGGCTTGTAAATGTCT120.10843046896177824No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT120.10843046896177824No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCTGC120.10843046896177824No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTCAGGGTAATTCTGGCCTTG120.10843046896177824No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGTAAACAAACTTCTGGC120.10843046896177824No Hit
CATAGAGCCAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA120.10843046896177824No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGAAGACTGACACTGCCCGATCGC120.10843046896177824No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC120.10843046896177824No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGTCTCCACAAGTCCGCGCAGAGC120.10843046896177824No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC120.10843046896177824No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)