FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806720

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806720
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences96257
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1216712.640119679607716No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT40704.228263918468268No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG32263.35144457026502No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA29373.051206665489263No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA27802.8881016445557206No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG23252.4154087494935434No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT21632.247109301141735No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG14961.5541726835450929No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG12751.3245789916577495No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA11191.1625128562078602No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA10971.1396573755674912No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT10221.0617409642935058No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT10031.0420021401040962No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA9570.9942134078560521No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT8800.9142192256147605No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT8570.8903248594907383No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA8390.871624920784982No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT8170.8487694401446129No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC7650.7947473949946499No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT7630.7926696240273435No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT7150.742803120811993No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA7060.7334531514591147No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT6020.6254090611591884No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA5800.6025535805188195No Hit
CATAGACCATCCCTTCTACAAGAGGCATACGATAGCGAGAAGAGTGGAGG5460.5672314740746128No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT5400.5609981611726939No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA4950.5142483144083028No Hit
CATAGATCCCATACTCCTCCATTACCCTGGGAAAGGTATGTGGCACATCT4820.500742803120812No Hit
CATAGACCACACACACAACTGAGAGTACGGCAACATATCAGAAGCATCTA4290.4456818724871957No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT4010.4165930789449079No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT3960.41139865152664223No Hit
CATAGACCATCCCTTCTACAAGAGGCAGTGTAACTTATCTGGGCACGGTG3900.4051653386247234No Hit
CATAGACCATCCCTTCTACAAGAGGCAGTGTGTACGGCAACATATCAGAA3750.3895820563699263No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT3570.3708821176641699No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC3540.36776546121321047No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGCAACATATCAGAAGCATCT3470.36049326282763855No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGAACTTATCTGGGCACGGTG3440.35737660637667906No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGCTCTGTTTACTCGGAGAT3180.3303655838016975No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGCAACATATCAGAA3150.32724892735073813No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCACTGAGCTGAGGGTC3140.32621004186708497No Hit
CATAGAGGCACGATCTTGTTTCACTGTTACACATAGGGCACTGAGACCAC3130.32517115638343186No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGACGGCAACATATCAGAAG3010.3127045305795942No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG2890.30023790477575657No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT2810.29192682090653144No Hit
CATAGACCACACACACAACTGAGAGTCATAGACCTTTTTCTGTAGTCAAG2810.29192682090653144No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTCTTCAGCTCTTTGAGG2770.2877712789719189No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGAAGACACAGCACACTCTTC2700.2804990805863469No Hit
CATAGATCCCATACTCCTCCATTACCCTACGGCAACATATCAGAAGCATC2690.2794601951026938No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTTGGGAAAGGTATGT2640.2742657676844282No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC2620.27218799671712185No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG2620.27218799671712185No Hit
CATAGACACACTGACAATTTGCACCTGGGAAAGGTATGTGGCACATCTAT2590.2690713402661625No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGTAGGAATCTTTGGGAGGCTA2510.26076025639693734No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGATAGCGAGAAGAGT2470.25660471446232486No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCAGCATTCTCTCAGGGCTGTTCT2460.2555658289786717No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC2440.25348805801136537No Hit
CATAGATCACCAGATGCCAGTTGTGCTACCGTAAGCTTACACTGCACATG2440.25348805801136537No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACGGCAACATATCAGAAGCAT2430.25244917252771226No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGACTTGGTCTCATAGAGGCAC2420.25141028704405916No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA2410.250371401560406No Hit
CATAGAGGCACGATCTTGTTTCACTGTGAGTGTGTGGGTAGAGAGTTCTG2390.24829363059309972No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCAGCTACTCGGGAGGCTGAGGCA2380.2472547451094466No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC2380.2472547451094466No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACACGGAAGACACAGCACACTCTT2370.24621585962579345No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATTCTGTTTACTCGGAGATTT2310.23998254672387465No Hit
CATAGAGGCACGATCTTGTTTCACTGTCACTGAGCTGAGGGTCACTTCTA2300.23894366124022148No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT2270.23582700478926208No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGAAGACACAGCACACTCTTC2240.23271034833830267No Hit
CATAGAGGTGAGCGGCTGTCTCCAACAATGCCTCACACACAGGTCTATGT2230.23167146285464954No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTAACCTCCCACCCCAGCTGTCTAT2180.22647703543638384No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCCCCAGGTAGCAAAACAGAGTCTA2160.22439926446907757No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACCGTAGATAGCGAGAA2140.22232149350177127No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG2120.22024372253446503No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGGCAACATATCAGAAGCA2090.21712706608350563No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGGAGCTGACTTACTGTTCTAT2070.21504929511619933No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG1990.20673821124697422No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCTCAACTTATCTGGGCACGGTGGT1930.20050489834505542No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA1920.19946601286140228No Hit
CATAGAACCAACCTCTCTATCTCCGTAGGAATCTTTGGGAGGCTATTAGT1900.197388241894096No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC1850.1921938144758303No Hit
CATAGACCATCCCTTCTACAAGAGGCACACTGTCTTCAGCTCTTTGAGGC1840.1911549289921772No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTCTGTTTACTCGG1830.19011604350852404No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAACCATGTCGTCA1800.18699938705756464No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT1800.18699938705756464No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGCACATAGGAGGAGCTGACTT1780.18492161609025837No Hit
CATAGAAACAGCAAAGCCCTCCACCATGCAGCAGACTGCTGGCCCAGTCC1780.18492161609025837No Hit
CATAGAGTCCTTCCCTCTCACACATGTTACGATAGCGAGAAGAGTGGAGG1780.18492161609025837No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAGAACCATGTCGTCAG1750.18180495963929896No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA1730.1797271886719927No Hit
CATAGAGCCCCCAGAGAAGAATGACCTACGGCAACATATCAGAAGCATCT1720.17868830318833953No Hit
CATAGATCCCATACTCCTCCATTACCCTGGTAAGGAATCTTTGGGAGGCT1720.17868830318833953No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA1670.17349387577007386No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGGGAAAGGTATGTGGCA1660.17245499028642072No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT1660.17245499028642072No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACCGTACAGGGCAGAGAGTGT1630.16933833383546132No Hit
CATAGACCACACACACAACTGAGAGTCACTGAGCTGAGGGTCACTTCTAT1600.16622167738450191No Hit
CATAGATCCCATACTCCTCCATTACCCTGCAAGTGTATATCTAGGAGTAG1580.16414390641719565No Hit
CATAGAGCCCCCAGAGAAGAATGACCGAGCCCCCAGGTAGCAAAACAGAG1560.16206613544988935No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATCCCCAGGTAGCAAAACAGA1560.16206613544988935No Hit
CATAGATCACCAGATGCCAGTTGTGCTACGGCAACATATCAGAAGCATCT1540.15998836448258308No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCCCCAGGTAGCAAAACAGAGTC1530.15894947899892994No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1520.1579105935152768No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC1460.15167728061335797No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAAGGAATCTTTGGGAG1440.1495995096460517No Hit
CATAGATCACCAGATGCCAGTTGTGCCAGCTGGGTAGAGAGTTCTGTAGA1420.14752173867874546No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTAATTAGCCCCAGGTAGCAAAA1410.1464828531950923No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCCAGGTAGCAAAACAGAGTCTAT1380.1433661967441329No Hit
CATAGACCCCCTTGAGTTCACTGGACATGGGGTCTATGTGTAGAGCTTAC1370.14232731126047976No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC1370.14232731126047976No Hit
CATAGAAGTACCATCAGAGTGAACAGGTCACTGACAGGTCTTAAAGCTCT1370.14232731126047976No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1350.14024954029317346No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA1350.14024954029317346No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTCAGTGTGAACTTATCTGG1340.13921065480952036No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGCTGTGTCTTCAGCTCTTTGAGGC1320.1371328838422141No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTGTGTCTTCAGCTCT1310.13609399835856092No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACGGCAACATATCAGA1310.13609399835856092No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1300.1350551128749078No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGGAGGAGAATGATATTG1280.13297734190760152No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT1250.12986068545664212No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG1250.12986068545664212No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT1230.12778291448933585No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGTACGATAGCGAGAAGAGTGGAGG1230.12778291448933585No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTACACGGCAACATATCAGA1230.12778291448933585No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCAGTCCAGCTCCTTCTATGTGTAG1200.12466625803837642No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT1200.12466625803837642No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCAGGGCAGAGAGTG1180.12258848707107015No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGAACCATCAGGGCAGAGAGTGT1160.12051071610376389No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC1150.11947183062011074No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATACAGGGCAGAGAGTGTGTTG1140.11843294513645762No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1110.11531628868549819No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA1090.11323851771819192No Hit
CATAGAGTCCTTCCCTCTCACACATGTGCAATATGGGCTGGGTGATCTAT1080.11219963223453878No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACACTGAAGACCTTTTTCTGT1070.11116074675088564No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACACATAGGAGGAGCTGACTT1040.10804409029992623No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTGCTGTGTCTTCAGCTCTTTG1030.10700520481627311No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCTGCTACTGTAGCATTCTCTCA1020.10596631933261996No Hit
CATAGATGAGTGTCCTTGTAGATGTGCATTCTCTCAGGGCTGTTCTCTAT1010.10492743384896684No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA1010.10492743384896684No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACCGTACCTCTAGCCAA1010.10492743384896684No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGGGTAGAGAGTTCTGTA1000.1038885483653137No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCTCTAGCCAAATTCCTTACCGATC1000.1038885483653137No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA990.10284966288166056No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT980.10181077739800741No Hit
CATAGACACACTGACAATTTGCACCTGTACATTGAGGAGAATGATATTGT970.10077189191435429No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT970.10077189191435429No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)