FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806729

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806729
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30749
Sequences flagged as poor quality0
Sequence length150
%GC48

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG955731.08068555074962No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGGACCTAAGGCTGGTCTCAAA15555.057075026830141No Hit
CATAGACCAACATTTCTTCTCCCAGGGTATAAAGCTGGACCCTCTCTGGG9933.2293733129532667No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACCAGTGAAGCAGAGCTTCCCA9403.057009984064522No Hit
CATAGATCAAGGAAAACACCAGCCCATGCAAACTGTTCTAGGCAGAAGAA9323.0309928778171646No Hit
CATAGACCCAGATGCTGTCCCACTAACTATAAGCCATAGGACAATGAATC9283.017984324693486No Hit
CATAGATCACGTAGAAACTGGAGAGGCCAGTGCAGTGGGGAGGCAGGCTG6822.2179583075872387No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGGGGTTACCACCTTGCAAGA6752.1951933396208005No Hit
CATAGACAGTGCCTTTGTGCGTGTTAGGAGAGCTTCACAACCTTGAAAGG6352.0651078083840124No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAGTTCTGCTTGTGGTGAGTTGAC4671.518748577189502No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA4571.4862271943803051No Hit
CATAGATGGCCAAGATACGAGCACATAATAATTCTAACTCAGTCAAATTT4391.4276887053237504No Hit
CATAGACTTGAAAGTGATAACTGAGAGGTAAACAAATGATTTTTCCACTA4221.3724023545481154No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG3711.2065433022212104No Hit
CATAGACTCATTGCACTTTCCACAACTGTAATTGAACAACTATTTGAATA3441.1187355686363785No Hit
CATAGAAGCCATGAACACAGGATTGAAAAAAGATTGATAGACTACAGGAA3311.0764577709844223No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAAGCCAAACAATATAAAAGTCC3010.978893622556831No Hit
CATAGAGCTTTTTCTCCAGCCTCCAATAACTCAGTGACACTGTGGTAAAT2390.7772610491398094No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG2230.7252268366450941No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGATCAGCCTGGAAGAGGAAGT2190.7122182835214154No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG2140.6959575921168167No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC2090.6796969007122183No Hit
CATAGAGCTTGGGTGCGAACATCAACATGTGAAGGAAAATGACGGTTATA2060.6699404858694592No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGTGGCTCACATCTCTAATCCCAG1910.6211584116556635No Hit
CATAGACATTTAATCCTCACAATGACCCATCATAATGTTGGTCTAAGATG1900.6179062733747439No Hit
CATAGACCCAAGACCCCAGCCTTTACAGCTTGCCTGCTGGGTTTATTTCT1750.5691241991609484No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA1620.5268464015089922No Hit
CATAGAACAGATGTTCTCCTTGTTTTCTATAACAGCAGTTCATCTGACAT1420.46180363589059803No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC1390.4520472210478389No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG1370.44554294448599957No Hit
CATAGAAAGGTGCAATCAAGCCAGTTAATGACACTTTCAGACTCAGCTTT1070.34797879605840837No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA1010.32846596637289016No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG910.29594458356369313No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC900.2926924452827734No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTGTTGTTTTGTTTTTGTTTTGAG870.2829360304400143No Hit
CATAGAGTGCCTGTTTCCTCATTCGTAAAATGAGGATGCTAATAGAACTA720.23415395622621873No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT680.2211454031025399No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG670.21789326482162022No Hit
CATAGAGTCCAACTATTCCAGCACCATTTTCTAAAAAGGCTATATTTTGT660.2146411265407005No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG660.2146411265407005No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGCTCCACCACTGCAATGAAGA660.2146411265407005No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG650.2113889882597808No Hit
CATAGACCTCCGACAGTTTTTATGCACTGAAATAATACTAAATTAAAGCT640.20813684997886112No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG640.20813684997886112No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG630.2048847116979414No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT590.19187615857426257No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT540.17561546716966406No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA530.17236332888874434No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA510.16585905232690493No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC460.1495983609223064No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCTGTTCAATTAGGAAAAT450.1463462226413867No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA440.143094084360467No Hit
CATAGATCATGGGACTTCAGCATGGCCACTTTGATCCTAACTCTGAATTC440.143094084360467No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG440.143094084360467No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG440.143094084360467No Hit
CATAGATCATGGGACTTCAGCATGGCCACTGACGACATGGTTCTACACAT420.1365898077986276No Hit
CATAGATGAGGACACCATAAAGACAACATAGAAAATTATCGTGCTAAGGC420.1365898077986276No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG400.13008553123678818No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA400.13008553123678818No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG380.12358125467494879No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG370.12032911639402909No Hit
CATAGATCATGGGACTTCAGCATGGCTTAAGACTCAGAATGTTTTGTTGC360.11707697811310937No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA360.11707697811310937No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTACG360.11707697811310937No Hit
CATAGACCGCTTCCCAATTTTTGTAACATGCTTCCTGTTCCACTGAGGCA350.11382483983218966No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGTTCTACACA350.11382483983218966No Hit
CATAGACGGATTATTCTCTCCATGGTCTAAATAATCTCAGTTTGCCAGGC340.11057270155126996No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGTG330.10732056327035025No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)