FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806730

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806730
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30749
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA938830.531074181274185No Hit
CATAGAGCAACCCCAGCAGTTTGAGAGGCCGAAGAGGGCCAATTGCTTGA15074.900972389345995No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGGTGCGATGGCTTTCTGACT9583.115548473121077No Hit
CATAGATGGGACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGCAACT9273.0147321864125662No Hit
CATAGATTCCTCCAAAGACTGCAGGGGTCAGTCTTCAGCCCACCCATGCC9192.9887150801652087No Hit
CATAGATTCAGAGAAGGACAGCGTGGTCACATAGGTTGCTAGACAGATTT8972.917168037984975No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCTAGGATTTGAGCTCATG6622.1529155419688446No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAGGAAATGATTTCCCTTGAA6522.1203941591596474No Hit
CATAGACCCCATGACTCAGCTCCTCATTCTAAAAAAGAACGATGAAATAC6362.068359946664932No Hit
CATAGAAGTATTCACACTGGGGCCCAGCCACGGTCAGTTCCCACAGCCAC4651.5122443006276627No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA4601.4959836092230643No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAATGCTATGAAATAGCTTCAGAT4171.3561416631435168No Hit
CATAGAGCAGCTTGAATTCTCCTCAGAAAATGGGATTTTCTTTTCTATTG4051.3171160037724803No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG3641.1837783342547725No Hit
CATAGATGCCACCACACCCAGTTAATTTTGTCTTTTTAGTAGAGATGGGA3391.1024748772317798No Hit
CATAGAGGCTGCAGTGAACAATGATCGATCCGCTGCACTCCAGGGAAACT3381.0992227389508602No Hit
CATAGATGGTATTTGAGTGGGGAAACAGATCCAAACCATATCATACCCCA3111.0114150053660282No Hit
CATAGATGACATGGGAAATTATGCTGCTTTTCATAACAGTGAGGAGCAGA2230.7252268366450941No Hit
CATAGACCTCCCATGGTTCCTGATGATCTCAGGATAAAGTCTAAACACCT2220.7219746983641745No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG2190.7122182835214154No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG2160.7024618686786562No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG2070.6731926241503788No Hit
CATAGACCCTCTCTTACCCTTCCACCTTCTGTCATGAAATGATGCAGCAA1980.6439233796221016No Hit
CATAGAGCAACAATGAAGGTGCACAAACACTTCTCTACTTACTGGCATAG1940.6309148264984227No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGGCAACTTGCTTGTCTCAATCTCCT1910.6211584116556635No Hit
CATAGATGGCAAATGGTGGGATCTCTTCTTTTTCTTGTTCATCAACTGTC1640.5333506780708316No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA1620.5268464015089922No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGTACATTTAACATTTCTACCT1510.4910728804188754No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC1380.44879508276691926No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG1360.4422908062050798No Hit
CATAGAACACCTGAACTACATAGCGGATACATAACTTCTGGTAGCACTGG1080.3512309343393281No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA1040.3382223812156493No Hit
CATAGATTCAGTTTACTTAGAGGCAGACACTTAGCCTGAGATCACACCAC1000.32521382809197047No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA890.28944030700185375No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT820.2666753390354158No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT690.22439754138345963No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA690.22439754138345963No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG690.22439754138345963No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACTTACTAAATATTAAGTCTCTT660.2146411265407005No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA610.19838043513610198No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGTGCAGAGCCTTCAGGTCA600.1951282968551823No Hit
CATAGATCTCCTCTCTGTAATGCACCAGCTTCGATAAAGATGCAGAGGCA600.1951282968551823No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTATTTCTTATTTCCTTAACAAAT580.18862402029334288No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGCTCAGGCTGGTCTTCAGATTCGT570.18537188201242316No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT550.17886760545058378No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT540.17561546716966406No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA540.17561546716966406No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA530.17236332888874434No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA520.16911119060782465No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT510.16585905232690493No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT510.16585905232690493No Hit
CATAGATCTAGCCCATCACTTCAGCATAAACATATTTCCCCTTTGGGATT500.16260691404598523No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG490.15935477576506554No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGTCTTCAGGTCA490.15935477576506554No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA450.1463462226413867No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA450.1463462226413867No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA450.1463462226413867No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC440.143094084360467No Hit
CATAGAAGTCTCGCTCTGTCATGCAATGGTGTGATCTTGGCTCACTGAGA440.143094084360467No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT430.1398419460795473No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGCTTCCAGTAAGCAAAGCTTGAATT420.1365898077986276No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG410.1333376695177079No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCACAGAGCCTTCAGGTCA380.12358125467494879No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCCCACAGTGGCCTTTCCCAG380.12358125467494879No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAATAATGTTGTGATGATTACA370.12032911639402909No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA340.11057270155126996No Hit
CATAGAGCAAGCCCTCTAAGCCTATCAGGTCTATCTGCCCCATTTCTGTG330.10732056327035025No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGGGAGTTCTTGCCTTAAAGAAGCAA310.10081628670851085No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)