FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806731

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806731
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences153861
Sequences flagged as poor quality0
Sequence length150
%GC38

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA152949.940140776415076No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG83305.413977551166313No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC76904.99801769129279No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG74324.830333872781276No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG65894.282436744854121No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG57993.7689862928227424No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA52843.434268593080768No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG48343.1417968166071972No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA34462.239683870506496No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA31102.021304944072897No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC30121.957611090529764No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT27891.8126750768550834No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT26941.7509310351551077No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT25811.6774881223961888No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG22731.4773074398320563No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC19691.2797265063921333No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC19681.2790765691110808No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA19151.2446298932153048No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT16291.0587478308343243No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT16181.0515985207427483No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA16021.0411995242459104No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG14540.9450088066501583No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA12080.7851242355112732No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT11970.7779749254196969No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT11170.7259799429355067No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG11080.7201305074060353No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA10950.7116813227523544No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG10840.7045320126607783No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA9920.6447377828039594No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC9820.6382384099934356No Hit
CATAGAAAGGTGCAATCAAGCCAGTTACACTGACGCTATACCACACTACA9800.6369385354313308No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG9060.5888431766334549No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG8590.5582961244239931No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA8430.5478971279271551No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGCTATACCACACTACA8360.5433475669597885No Hit
CATAGATCAAGGAAAACACCAGCCCAACACTGACGCTATACCACACTACA8290.5387980059924217No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGGCTCAGGTATGTCTTTAT7670.4985018945671743No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG7430.4829033998219172No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT7390.4803036506977077No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGCCCTCTCTGCTGTTCCTT6660.432858229180884No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT5870.38151318397774614No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC5600.3639648773893319No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA5380.3496662572061796No Hit
CATAGACCGCTTCCCAATTTTTGTAACAAGGGGTAAGGCGTACTGGTCTA5130.3334178251798701No Hit
CATAGATGTGTAGCCTGGGTCTGACATTGCTTCTTGTGGTAACTGGTCTA5090.33081807605566066No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC4890.317819330434613No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG4840.31456964402935117No Hit
CATAGACCAACATTTCTTCTCCCAGGGTTCTCCCAAGTATTAGAGCAAGT4490.2918218391925179No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCCCAACTGTCTCTGAA4390.28532246638199416No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT4390.28532246638199416No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGCTATACCACACTACA4360.283372654538837No Hit
CATAGAAAAAACAGTTGGCCAGGCATTGGGCCCCAGTGTGAATACTTCTA4200.2729736580419989No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT3980.2586750378588466No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACACACTGTCATTGTCGCTGTC3920.25477541417253236No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACCACATAGAGATCCCACCATT3890.25282560232937523No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT3730.24242660583253714No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTGCTGAAGTGATGGGCTAG3720.2417766685514848No Hit
CATAGACCAGCAGACACTCCCATCATTCAGACTCTATGTGTAGCAAGGGG3390.22032873827675628No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGGTGGAAGGGTAAGAGAGGGT3390.22032873827675628No Hit
CATAGACGGATTATTCTCTCCATGGTCTATGCAAGGGGTAAGGCGTACTG3250.211229616342023No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT3240.21057967906097064No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG2790.18133250141361357No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCACATAGAGTGTCTGTTTCCCCA2770.18003262685150884No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT2700.17548306588414217No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGACATTGCTTCTTGT2600.1689836930736184No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG2570.16703388123046126No Hit
CATAGAAATGATGCTGAAGGGCCTGCACACTGACGACATGGTTCTACACA2500.16248432026309462No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCATCAGGAACCATGGG2400.15598494745257083No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT2320.15078544920415182No Hit
CATAGAGAAGACTCCCTCAACCCACCATTGTCTGCCTCTAAGTAAACTGA2200.14298620183152327No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC2200.14298620183152327No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT2160.14038645270731373No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG2140.139086578145209No Hit
CATAGACCTCCGACAGTTTTTGTGCACCTTCATTGTTGCTCTATGAGACC2120.13778670358310424No Hit
CATAGACATTTAATCCTCACAATGACCCATACACTGACGACATGGTTCTA2070.13453701717784233No Hit
CATAGAAATGATGCTGAAGGGCCTGCGAAATGATGCTGAAGTGATGGGCT2040.1325872053346852No Hit
CATAGATCCACGTGAGAATAAAGCATACACTGACGACATGGTTCTACACA1920.12478795796205665No Hit
CATAGACTTGAAAGTGATAACTGAGAGGTAAACACACTGACGATCATTGT1900.1234880833999519No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAGAAATGATGCTGAAGTGATGG1890.12283814611889951No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT1850.12023839699469002No Hit
CATAGAAGGACAAAGACATTTAGGACCCCGGCATACTGCAAGACAGAGCT1810.11763864787048049No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTCAAGGGGTAAGGCGTACT1800.11698871058942813No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG1760.11438896146521861No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA1750.11373902418416622No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTTTGCAGATTTGGACCTGCGAG1720.11178921234100908No Hit
CATAGAAATGATGCTGAAGGGCCTGCTAGAAATGATGCTGAAGTGATGGG1700.11048933777890434No Hit
CATAGAAATGATGCTGAAGGGCCTGGTTCTACACATAGAAATGATGCTGA1560.10139021584417104No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)