FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806735

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806735
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16358
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG728444.528670986673184No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGATCTATGAGA6884.205893140970779No Hit
CATAGATGTCTCCCAGGCTAGAGTGAGCCCTTGTCCCTTTCTATGAGACC3992.439173493092065No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTTCTACACA3171.937889717569385No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGTGAGAAATGATGATGGCT2441.4916248930187064No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGAGAGGCTGTTTGAGATCT2351.436605942046705No Hit
CATAGATCATGGGACTTCAGCATGGTGGGTGCCTGATTGTTCTATGAGAC2261.3815869910747034No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTTCTACACAT1901.1615111871866977No Hit
CATAGAACAAGGCCAGAATTACCCTGGGAGAGGCTGTTTGAGATCTATGA1630.9964543342706932No Hit
CATAGAGAATTTGCACACCACGGGACCATGCTCACACCTTGATCTATGAG1510.9230957329746914No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCACTGACGACATGGTTCTACACAT1410.8619635652280231No Hit
CATAGACTTGATGCCCAGGAAACCTCCTGCCCCTGCAGGCTGAAAGTGCC1200.7335860129600196No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAATCAGGGTTGGTTCTATGAGACC1140.6969067123120186No Hit
CATAGAACAAGGCCAGAATTACCCTGGGTGAGAAATGATGATGGCTCTAT1040.6357745445653502No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGCAACAGAACAACAACATCTATG1040.6357745445653502No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACGACATGGTTCTACAC1010.6174348942413498No Hit
CATAGACCTTCCTGTTGGCCACACAGAATTAGCGGAGAGTGAGAACTCTA850.5196234258466805No Hit
CATAGAGCTTCTTTCTGTTCATATTGGGGAACAGAACAACAACATCTATG840.5135102090720137No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGACACTGACGACATGGTGGGT760.46460447487467904No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTGCTACCGTACTGGGTGAGAAA760.46460447487467904No Hit
CATAGAGGGTGTTTTTCGGTGTTACAACCAATGCTCTTTCATCTATGAGA760.46460447487467904No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGCTACCGTATGGGCAACAGA690.4218119574520112No Hit
CATAGAACAAGGCCAGAATTACCCTGTGCTCATACAGAATTAGATCTAGC690.4218119574520112No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGTGAGCCCTTGTCCCTTTCTATG670.40958552390267755No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGTGTAGAATTAGCGGAGAGTGA630.38513265680401026No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACATGGATGAAGC600.3667930064800098No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCCTGAGATTGCTGCTAT540.3301137058320088No Hit
CATAGAGGGTGTTTTTCGGTGTCACAACCAATGCTCTTTCATCTATGAGA530.32400048905734197No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGTGAGAAATGATGATGGC490.2995476219586747No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG470.287321188409341No Hit
CATAGACAGGAGGAGGAAGAAGAGGACCATGCTCACACCTTGATCTATGA440.26898153808534053No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG430.26286832131067367No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTCTATGAGACCAAGTCTCTGC420.25675510453600686No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAACCCAAAGAGTGAGCCCTTGTCC420.25675510453600686No Hit
CATAGACAGCTCACAGACTGCATACTTCAGTTGACTATAAGAAACACCTC420.25675510453600686No Hit
CATAGACAGCTGACCAGAAAATGTTTCAGACATGTTTCCTAGTTTCAGTT420.25675510453600686No Hit
CATAGAGAAGAGAAGGCGACAATGGCCGCTAAGCCGAGAAGATCTCTATG400.2445286709866732No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG400.2445286709866732No Hit
CATAGAACTATGTCAAGAGAATTTTGCACACCACGGGACCATGCTCACAC390.23841545421200636No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACACTGACGACATGGTGGGTGCCT390.23841545421200636No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG390.23841545421200636No Hit
CATAGACTTGATGCCCAGGAAACCTCACACTGACGACATGGTGGGTGCCT370.22618902066267269No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCAACAGAACAACAACATC370.22618902066267269No Hit
CATAGATCTGTGGCTCCCGATAAATGTGCTCATACAGAATTAGATCTAGC340.2078493703386722No Hit
CATAGACAGCTCACAGACTGCATACTACACTGACGACATGGTGGGTGCCT340.2078493703386722No Hit
CATAGATTCTCCCTTGTGCTTTTGGTACGGAGCAGGCAGTCTCAAACGTT330.20173615356400537No Hit
CATAGACCCTTAGAGTTTCAGCCTCCACACTGACTCTTCACTATGTCATC310.18950972001467173No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACACTGACGACATGGTGGGTG300.1833965032400049No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG300.1833965032400049No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG290.17728328646533806No Hit
CATAGAATCAAAATAGTACCCTTGCCTCTAGAGACTTGTGCTCATACAGA280.17117006969067122No Hit
CATAGATGTCTCCCAGGCTAGAGTGCGCCCTTGTCCCTTTCTATGAGACC280.17117006969067122No Hit
CATAGAACCCAAAGAGTGAGCAGCAGAGAGTGAGCCCTTGTCCCTTTCTA280.17117006969067122No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG270.1650568529160044No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG260.15894363614133755No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG260.15894363614133755No Hit
TAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGAG240.1467172025920039No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCGACATGGTTCTACACATAGAACC240.1467172025920039No Hit
CATAGAACAGACACAAATCTCAAAGCTTCTGGGAGAGGCTGTTTGAGATC240.1467172025920039No Hit
CATAGACCACACCCAAACACCACGTACACTGACGACATGGTGGGTGCCTG240.1467172025920039No Hit
CATAGAGGGTGTTTTTCGGTGTCACACACTGACGACATGGTTCTACACAT230.1406039858173371No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTACAGATTTGGACCTGCG230.1406039858173371No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCCCAAAGAGTGAGCCCTTGTCCCT230.1406039858173371No Hit
CATAGAGGGCCAGAAGTTTGTTTACCTACACTGACGACATGGTGGGTGCC230.1406039858173371No Hit
CATAGAGAATTTGCACACCACGGGACATGGATGAAGCTGGACCTATGAGA230.1406039858173371No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCTTGGGTGACAGAGTGAGTCTATG210.12837755226800343No Hit
CGTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG200.1222643354933366No Hit
CATAGACACTGATAGGTTCCAACTTTCCTGGGCATCAAGTCTATGGGCAA200.1222643354933366No Hit
CATAGAACCCAAAGAGTGAGCAGCAGGTTCTACACATAGAACCCAAAGAG190.11615111871866976No Hit
CATAGATCTGTGGCTCCCGATAAATGTGGAGACAGCCGCTCACCTCTATG190.11615111871866976No Hit
CATAGAACAAGGCCAGAATTACCCTGCACTGACGACATGGTTCTACACAT190.11615111871866976No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG180.11003790194400292No Hit
CATAGAACCCAAAGAGTGAGCAGCAGTTCTACACATAGAACCCAAAGAGT180.11003790194400292No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGATCTGCG180.11003790194400292No Hit
CATAGAACAAGGCCAGAATTACCCTGTGTTCATACAGAATTAGCGGAGAG170.1039246851693361No Hit
CATAGAACCCAAAGAGTGAGCAGCAGCATGGTTCTACACATAGAACCCAA170.1039246851693361No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCA170.1039246851693361No Hit
CATAGATTAGTTCTTATTCTTGGTATGGCACATATACACCATGGAATACT170.1039246851693361No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG170.1039246851693361No Hit
CATAGATCTTTGGTAGATATGGGGTCTCCCAGGCTAGAGTGAGCCCTTGT170.1039246851693361No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)